RNA–Protein interactions for RNA: ENST00000327726.10

CFD-201, Transcript of complement factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CFD, Length 1,201 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-201ENST00000327726 LCE3AQ5TA76 89 aa7.55□□□□□ -1.2
CFD-201ENST00000327726 PP632Q6XCG6 107 aa7.54□□□□□ -1.2
CFD-201ENST00000327726 PCP4P48539 62 aa7.53□□□□□ -1.2
CFD-201ENST00000327726 KRTAP4-9Q9BYQ8 210 aa7.53□□□□□ -1.2
CFD-201ENST00000327726 GPR98Q8WXG9 6306 aa7.49□□□□□ -1.21
CFD-201ENST00000327726 MT1MQ8N339 61 aa7.4□□□□□ -1.22
CFD-201ENST00000327726 RPS28P62857 69 aaKnown RBP7.39□□□□□ -1.23
CFD-201ENST00000327726 MT1LQ93083 61 aa7.39□□□□□ -1.23
CFD-201ENST00000327726 K7ERS5 55 aa7.35□□□□□ -1.23
CFD-201ENST00000327726 LCE1DQ5T752 114 aa7.35□□□□□ -1.23
CFD-201ENST00000327726 LCE4AQ5TA78 99 aa7.35□□□□□ -1.23
CFD-201ENST00000327726 A6NED7 52 aa7.34□□□□□ -1.23
CFD-201ENST00000327726 KRTAP25-1Q3LHN0 102 aa7.27□□□□□ -1.25
CFD-201ENST00000327726 HMCN1Q96RW7 5635 aa7.27□□□□□ -1.25
CFD-201ENST00000327726 MT4P47944 62 aa7.25□□□□□ -1.25
CFD-201ENST00000327726 KRTAP12-3P60328 96 aa7.23□□□□□ -1.25
CFD-201ENST00000327726 KRTAP4-3Q9BYR4 195 aa7.19□□□□□ -1.26
CFD-201ENST00000327726 KRTAP5-4Q6L8H1 288 aa7.15□□□□□ -1.26
CFD-201ENST00000327726 AHNAK2Q8IVF2 5795 aa7.08□□□□□ -1.28
CFD-201ENST00000327726 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
CFD-201ENST00000327726 CDC42SE1Q9NRR8 79 aa7.04□□□□□ -1.28
CFD-201ENST00000327726 KRTAP23-1A1A580 65 aa6.99□□□□□ -1.29
CFD-201ENST00000327726 ROMO1P60602 79 aa6.96□□□□□ -1.3
CFD-201ENST00000327726 KRTAP9-9Q9BYP9 154 aa6.95□□□□□ -1.3
CFD-201ENST00000327726 KRTAP9-4Q9BYQ2 154 aa6.95□□□□□ -1.3
CFD-201ENST00000327726 KRTAP5-10Q6L8G5 202 aa6.9□□□□□ -1.3
CFD-201ENST00000327726 KRTAP15-1Q3LI76 137 aa6.82□□□□□ -1.32
CFD-201ENST00000327726 KRTAP5-5Q701N2 237 aaPredicted RBP6.79□□□□□ -1.32
CFD-201ENST00000327726 KRTAP4-12Q9BQ66 201 aa6.78□□□□□ -1.32
CFD-201ENST00000327726 KRTAP20-2Q3LI61 65 aa6.76□□□□□ -1.33
CFD-201ENST00000327726 SPRR5A0A1B0GTR4 108 aa6.74□□□□□ -1.33
CFD-201ENST00000327726 KRTAP19-4Q3LI73 84 aa6.73□□□□□ -1.33
CFD-201ENST00000327726 KRTAP12-4P60329 112 aa6.72□□□□□ -1.33
CFD-201ENST00000327726 KRTAP5-3Q6L8H2 238 aa6.72□□□□□ -1.33
CFD-201ENST00000327726 LCE3CQ5T5A8 94 aa6.68□□□□□ -1.34
CFD-201ENST00000327726 KRTAP5-7Q6L8G8 165 aa6.67□□□□□ -1.34
CFD-201ENST00000327726 KRTAP4-2Q9BYR5 136 aa6.55□□□□□ -1.36
CFD-201ENST00000327726 BRK1Q8WUW1 75 aa6.54□□□□□ -1.36
CFD-201ENST00000327726 SYNE1Q8NF91 8797 aaKnown RBP6.5□□□□□ -1.37
CFD-201ENST00000327726 KRTAP9-6A8MVA2 160 aa6.36□□□□□ -1.39
CFD-201ENST00000327726 MT1AP04731 61 aa6.3□□□□□ -1.4
CFD-201ENST00000327726 KRTAP6-1Q3LI64 71 aa6.25□□□□□ -1.41
CFD-201ENST00000327726 KRTAP5-2Q701N4 177 aa6.22□□□□□ -1.41
CFD-201ENST00000327726 KRTAP4-11Q9BYQ6 195 aa6.22□□□□□ -1.41
CFD-201ENST00000327726 PMAIP1Q13794 54 aa6.13□□□□□ -1.43
CFD-201ENST00000327726 KRTAP6-2Q3LI66 62 aa6.01□□□□□ -1.45
CFD-201ENST00000327726 KRTAP5-8O75690 187 aa5.99□□□□□ -1.45
CFD-201ENST00000327726 PRAC1Q96KF2 57 aa5.95□□□□□ -1.46
CFD-201ENST00000327726 OBSCNQ5VST9 7968 aa5.91□□□□□ -1.46
CFD-201ENST00000327726 AHNAKQ09666 5890 aaKnown RBP5.89□□□□□ -1.47
CFD-201ENST00000327726 MUC5ACP98088 5654 aa5.86□□□□□ -1.47
CFD-201ENST00000327726 MUC5BQ9HC84 5762 aaPredicted RBP5.85□□□□□ -1.47
CFD-201ENST00000327726 PRO0628Q9UI54 55 aa5.83□□□□□ -1.48
CFD-201ENST00000327726 MT3P25713 68 aa5.8□□□□□ -1.48
CFD-201ENST00000327726 KRTAP5-1Q6L8H4 278 aa5.61□□□□□ -1.51
CFD-201ENST00000327726 KTN1-AS1Q86SY8 53 aa5.55□□□□□ -1.52
CFD-201ENST00000327726 LCE1EQ5T753 118 aa5.36□□□□□ -1.55
CFD-201ENST00000327726 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
CFD-201ENST00000327726 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
CFD-201ENST00000327726 LCE1CQ5T751 118 aa4.97□□□□□ -1.61
CFD-201ENST00000327726 LUZP6Q538Z0 58 aa4.86□□□□□ -1.63
CFD-201ENST00000327726 LCE3DQ9BYE3 92 aa4.84□□□□□ -1.63
CFD-201ENST00000327726 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
CFD-201ENST00000327726 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
CFD-201ENST00000327726 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
CFD-201ENST00000327726 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
CFD-201ENST00000327726 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
CFD-201ENST00000327726 KRTAP21-2Q3LI59 83 aa4.11□□□□□ -1.75
CFD-201ENST00000327726 PHGR1C9JFL3 82 aa4.05□□□□□ -1.76
CFD-201ENST00000327726 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
CFD-201ENST00000327726 MUC19Q7Z5P9 8384 aa3.63□□□□□ -1.83
CFD-201ENST00000327726 PRM1P04553 51 aa3.6□□□□□ -1.83
CFD-201ENST00000327726 INE1O15225 51 aa3.29□□□□□ -1.88
CFD-201ENST00000327726 A0A0A0MQY5 61 aa3.28□□□□□ -1.88
CFD-201ENST00000327726 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
CFD-201ENST00000327726 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
CFD-201ENST00000327726 H3BS24 57 aa2.52□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 826.7 ms