RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 KRTAP19-6Q3LI70 58 aa5.74□□□□□ -1.49
SSH1-201ENST00000326470 MT1LQ93083 61 aa5.71□□□□□ -1.5
SSH1-201ENST00000326470 MT1EP04732 61 aa5.67□□□□□ -1.5
SSH1-201ENST00000326470 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
SSH1-201ENST00000326470 CRCT1Q9UGL9 99 aa5.52□□□□□ -1.53
SSH1-201ENST00000326470 KRTAP9-6A0A140TA67 174 aa5.49□□□□□ -1.53
SSH1-201ENST00000326470 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
SSH1-201ENST00000326470 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
SSH1-201ENST00000326470 MUC12Q9UKN1 5478 aa5.38□□□□□ -1.55
SSH1-201ENST00000326470 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
SSH1-201ENST00000326470 MT1GP13640 62 aa5.34□□□□□ -1.56
SSH1-201ENST00000326470 MT1MQ8N339 61 aa5.28□□□□□ -1.56
SSH1-201ENST00000326470 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
SSH1-201ENST00000326470 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
SSH1-201ENST00000326470 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
SSH1-201ENST00000326470 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
SSH1-201ENST00000326470 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
SSH1-201ENST00000326470 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
SSH1-201ENST00000326470 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
SSH1-201ENST00000326470 KRTAP5-9P26371 169 aa5□□□□□ -1.61
SSH1-201ENST00000326470 LCE3BQ5TA77 95 aa4.99□□□□□ -1.61
SSH1-201ENST00000326470 MT1AP04731 61 aa4.94□□□□□ -1.62
SSH1-201ENST00000326470 KRTAP4-9Q9BYQ8 210 aa4.93□□□□□ -1.62
SSH1-201ENST00000326470 LCE1AQ5T7P2 110 aa4.9□□□□□ -1.62
SSH1-201ENST00000326470 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
SSH1-201ENST00000326470 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.64
SSH1-201ENST00000326470 SPRR2EP22531 72 aa4.84□□□□□ -1.64
SSH1-201ENST00000326470 SPRR2BP35325 72 aa4.84□□□□□ -1.64
SSH1-201ENST00000326470 SPRR2AP35326 72 aa4.84□□□□□ -1.64
SSH1-201ENST00000326470 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.64
SSH1-201ENST00000326470 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
SSH1-201ENST00000326470 LCE3DQ9BYE3 92 aa4.8□□□□□ -1.64
SSH1-201ENST00000326470 LCE3EQ5T5B0 92 aa4.76□□□□□ -1.65
SSH1-201ENST00000326470 NEBP20929 6669 aa4.73□□□□□ -1.65
SSH1-201ENST00000326470 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
SSH1-201ENST00000326470 PRM1P04553 51 aa4.66□□□□□ -1.66
SSH1-201ENST00000326470 SPRR2DP22532 72 aa4.64□□□□□ -1.67
SSH1-201ENST00000326470 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
SSH1-201ENST00000326470 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.69
SSH1-201ENST00000326470 KRTAP2-2Q9BYT5 123 aa4.42□□□□□ -1.7
SSH1-201ENST00000326470 MT3P25713 68 aa4.29□□□□□ -1.72
SSH1-201ENST00000326470 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
SSH1-201ENST00000326470 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
SSH1-201ENST00000326470 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
SSH1-201ENST00000326470 MT4P47944 62 aa4.13□□□□□ -1.75
SSH1-201ENST00000326470 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
SSH1-201ENST00000326470 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
SSH1-201ENST00000326470 LCE4AQ5TA78 99 aa4.11□□□□□ -1.75
SSH1-201ENST00000326470 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
SSH1-201ENST00000326470 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
SSH1-201ENST00000326470 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
SSH1-201ENST00000326470 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
SSH1-201ENST00000326470 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
SSH1-201ENST00000326470 KRTAP5-3Q6L8H2 238 aa3.8□□□□□ -1.8
SSH1-201ENST00000326470 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
SSH1-201ENST00000326470 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
SSH1-201ENST00000326470 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
SSH1-201ENST00000326470 KRTAP5-10Q6L8G5 202 aa3.49□□□□□ -1.85
SSH1-201ENST00000326470 KRTAP4-11Q9BYQ6 195 aa3.48□□□□□ -1.85
SSH1-201ENST00000326470 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
SSH1-201ENST00000326470 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.86
SSH1-201ENST00000326470 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
SSH1-201ENST00000326470 KRTAP5-8O75690 187 aa3.31□□□□□ -1.88
SSH1-201ENST00000326470 LCE1CQ5T751 118 aa3.28□□□□□ -1.89
SSH1-201ENST00000326470 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.89
SSH1-201ENST00000326470 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
SSH1-201ENST00000326470 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
SSH1-201ENST00000326470 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
SSH1-201ENST00000326470 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
SSH1-201ENST00000326470 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
SSH1-201ENST00000326470 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
SSH1-201ENST00000326470 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
SSH1-201ENST00000326470 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
SSH1-201ENST00000326470 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
SSH1-201ENST00000326470 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
SSH1-201ENST00000326470 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
SSH1-201ENST00000326470 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 5.5 ms