RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
LMNB2-201ENST00000325327 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
LMNB2-201ENST00000325327 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
LMNB2-201ENST00000325327 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
LMNB2-201ENST00000325327 DSTQ03001 7570 aaKnown RBP5.72□□□□□ -1.49
LMNB2-201ENST00000325327 MT1EP04732 61 aa5.7□□□□□ -1.5
LMNB2-201ENST00000325327 MT1LQ93083 61 aa5.66□□□□□ -1.5
LMNB2-201ENST00000325327 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
LMNB2-201ENST00000325327 FCGBPQ9Y6R7 5405 aaPredicted RBP5.61□□□□□ -1.51
LMNB2-201ENST00000325327 KMT2DO14686 5537 aa5.6□□□□□ -1.51
LMNB2-201ENST00000325327 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
LMNB2-201ENST00000325327 KRTAP12-4P60329 112 aa5.54□□□□□ -1.52
LMNB2-201ENST00000325327 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
LMNB2-201ENST00000325327 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
LMNB2-201ENST00000325327 MT1MQ8N339 61 aa5.5□□□□□ -1.53
LMNB2-201ENST00000325327 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.45□□□□□ -1.54
LMNB2-201ENST00000325327 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
LMNB2-201ENST00000325327 MACF1Q9UPN3 7388 aaKnown RBP5.42□□□□□ -1.54
LMNB2-201ENST00000325327 MT4P47944 62 aa5.42□□□□□ -1.54
LMNB2-201ENST00000325327 SSPOA2VEC9 5147 aa5.4□□□□□ -1.54
LMNB2-201ENST00000325327 MUC12Q9UKN1 5478 aa5.32□□□□□ -1.56
LMNB2-201ENST00000325327 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
LMNB2-201ENST00000325327 KRTAP6-3Q3LI67 103 aa5.27□□□□□ -1.57
LMNB2-201ENST00000325327 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
LMNB2-201ENST00000325327 KRTAP20-1Q3LI63 56 aa5.15□□□□□ -1.58
LMNB2-201ENST00000325327 LCE3DQ9BYE3 92 aa5.1□□□□□ -1.59
LMNB2-201ENST00000325327 MDN1Q9NU22 5596 aa5.06□□□□□ -1.6
LMNB2-201ENST00000325327 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
LMNB2-201ENST00000325327 KRTAP4-9Q9BYQ8 210 aa5.03□□□□□ -1.6
LMNB2-201ENST00000325327 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
LMNB2-201ENST00000325327 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
LMNB2-201ENST00000325327 MT3P25713 68 aa4.99□□□□□ -1.61
LMNB2-201ENST00000325327 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
LMNB2-201ENST00000325327 KRTAP9-6A8MVA2 160 aa4.93□□□□□ -1.62
LMNB2-201ENST00000325327 MT1AP04731 61 aa4.91□□□□□ -1.62
LMNB2-201ENST00000325327 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
LMNB2-201ENST00000325327 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
LMNB2-201ENST00000325327 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
LMNB2-201ENST00000325327 NEBP20929 6669 aa4.84□□□□□ -1.63
LMNB2-201ENST00000325327 KRTAP6-1Q3LI64 71 aa4.83□□□□□ -1.64
LMNB2-201ENST00000325327 LCE1BQ5T7P3 118 aa4.81□□□□□ -1.64
LMNB2-201ENST00000325327 KRTAP5-9P26371 169 aa4.74□□□□□ -1.65
LMNB2-201ENST00000325327 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
LMNB2-201ENST00000325327 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
LMNB2-201ENST00000325327 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
LMNB2-201ENST00000325327 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
LMNB2-201ENST00000325327 PRM1P04553 51 aa4.44□□□□□ -1.7
LMNB2-201ENST00000325327 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
LMNB2-201ENST00000325327 MUC19Q7Z5P9 8384 aa4.26□□□□□ -1.73
LMNB2-201ENST00000325327 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
LMNB2-201ENST00000325327 MUC5ACP98088 5654 aa3.99□□□□□ -1.77
LMNB2-201ENST00000325327 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
LMNB2-201ENST00000325327 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
LMNB2-201ENST00000325327 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
LMNB2-201ENST00000325327 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
LMNB2-201ENST00000325327 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
LMNB2-201ENST00000325327 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
LMNB2-201ENST00000325327 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
LMNB2-201ENST00000325327 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
LMNB2-201ENST00000325327 KRTAP5-3Q6L8H2 238 aa3.7□□□□□ -1.82
LMNB2-201ENST00000325327 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
LMNB2-201ENST00000325327 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
LMNB2-201ENST00000325327 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
LMNB2-201ENST00000325327 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
LMNB2-201ENST00000325327 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
LMNB2-201ENST00000325327 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
LMNB2-201ENST00000325327 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
LMNB2-201ENST00000325327 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
LMNB2-201ENST00000325327 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
LMNB2-201ENST00000325327 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
LMNB2-201ENST00000325327 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
LMNB2-201ENST00000325327 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
LMNB2-201ENST00000325327 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
LMNB2-201ENST00000325327 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
LMNB2-201ENST00000325327 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
LMNB2-201ENST00000325327 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
LMNB2-201ENST00000325327 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 87.7 ms