RNA–Protein interactions for RNA: ENST00000325222.8

CUL1-201, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 3,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-201ENST00000325222 KRTAP12-4P60329 112 aa4.73□□□□□ -1.65
CUL1-201ENST00000325222 FCGBPQ9Y6R7 5405 aaPredicted RBP4.68□□□□□ -1.66
CUL1-201ENST00000325222 MT1GP13640 62 aa4.68□□□□□ -1.66
CUL1-201ENST00000325222 KRTAP9-2Q9BYQ4 174 aa4.68□□□□□ -1.66
CUL1-201ENST00000325222 MUC12Q9UKN1 5478 aa4.67□□□□□ -1.66
CUL1-201ENST00000325222 LCE2DQ5TA82 110 aaPredicted RBP4.64□□□□□ -1.67
CUL1-201ENST00000325222 FSIP2Q5CZC0 6907 aa4.63□□□□□ -1.67
CUL1-201ENST00000325222 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
CUL1-201ENST00000325222 KRTAP9-6A0A140TA67 174 aa4.57□□□□□ -1.68
CUL1-201ENST00000325222 MT1MQ8N339 61 aa4.57□□□□□ -1.68
CUL1-201ENST00000325222 KRTAP19-6Q3LI70 58 aa4.53□□□□□ -1.68
CUL1-201ENST00000325222 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
CUL1-201ENST00000325222 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
CUL1-201ENST00000325222 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
CUL1-201ENST00000325222 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
CUL1-201ENST00000325222 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
CUL1-201ENST00000325222 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
CUL1-201ENST00000325222 PRM1P04553 51 aa4.26□□□□□ -1.73
CUL1-201ENST00000325222 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
CUL1-201ENST00000325222 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
CUL1-201ENST00000325222 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
CUL1-201ENST00000325222 MT1AP04731 61 aa4.22□□□□□ -1.73
CUL1-201ENST00000325222 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
CUL1-201ENST00000325222 LCE3DQ9BYE3 92 aa4.14□□□□□ -1.75
CUL1-201ENST00000325222 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
CUL1-201ENST00000325222 OBSCNQ5VST9 7968 aa4.13□□□□□ -1.75
CUL1-201ENST00000325222 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
CUL1-201ENST00000325222 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.11□□□□□ -1.75
CUL1-201ENST00000325222 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
CUL1-201ENST00000325222 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
CUL1-201ENST00000325222 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
CUL1-201ENST00000325222 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
CUL1-201ENST00000325222 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
CUL1-201ENST00000325222 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
CUL1-201ENST00000325222 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
CUL1-201ENST00000325222 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
CUL1-201ENST00000325222 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
CUL1-201ENST00000325222 SPRR2EP22531 72 aa3.74□□□□□ -1.81
CUL1-201ENST00000325222 SPRR2BP35325 72 aa3.74□□□□□ -1.81
CUL1-201ENST00000325222 SPRR2AP35326 72 aa3.74□□□□□ -1.81
CUL1-201ENST00000325222 NEBP20929 6669 aa3.67□□□□□ -1.82
CUL1-201ENST00000325222 LCE1DQ5T752 114 aa3.65□□□□□ -1.82
CUL1-201ENST00000325222 MT3P25713 68 aa3.64□□□□□ -1.83
CUL1-201ENST00000325222 KRTAP20-1Q3LI63 56 aa3.57□□□□□ -1.84
CUL1-201ENST00000325222 SPRR2DP22532 72 aa3.55□□□□□ -1.84
CUL1-201ENST00000325222 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
CUL1-201ENST00000325222 KRTAP4-6Q9BYQ5 205 aa3.32□□□□□ -1.88
CUL1-201ENST00000325222 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
CUL1-201ENST00000325222 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
CUL1-201ENST00000325222 MT4P47944 62 aa3.21□□□□□ -1.9
CUL1-201ENST00000325222 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
CUL1-201ENST00000325222 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
CUL1-201ENST00000325222 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
CUL1-201ENST00000325222 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
CUL1-201ENST00000325222 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
CUL1-201ENST00000325222 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
CUL1-201ENST00000325222 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
CUL1-201ENST00000325222 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
CUL1-201ENST00000325222 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
CUL1-201ENST00000325222 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
CUL1-201ENST00000325222 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
CUL1-201ENST00000325222 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
CUL1-201ENST00000325222 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
CUL1-201ENST00000325222 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
CUL1-201ENST00000325222 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
CUL1-201ENST00000325222 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
CUL1-201ENST00000325222 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
CUL1-201ENST00000325222 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
CUL1-201ENST00000325222 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
CUL1-201ENST00000325222 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
CUL1-201ENST00000325222 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
CUL1-201ENST00000325222 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
CUL1-201ENST00000325222 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
CUL1-201ENST00000325222 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
CUL1-201ENST00000325222 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
CUL1-201ENST00000325222 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
CUL1-201ENST00000325222 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms