RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
TRAPPC12-201ENST00000324266 MT1LQ93083 61 aa6.16□□□□□ -1.42
TRAPPC12-201ENST00000324266 MT1EP04732 61 aa6.13□□□□□ -1.43
TRAPPC12-201ENST00000324266 MACF1Q9UPN3 7388 aaKnown RBP6.1□□□□□ -1.43
TRAPPC12-201ENST00000324266 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.45
TRAPPC12-201ENST00000324266 SYNE2Q8WXH0 6885 aaKnown RBP5.97□□□□□ -1.45
TRAPPC12-201ENST00000324266 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
TRAPPC12-201ENST00000324266 LOC100996750A0A140TA64 210 aa5.92□□□□□ -1.46
TRAPPC12-201ENST00000324266 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
TRAPPC12-201ENST00000324266 MUC12Q9UKN1 5478 aa5.9□□□□□ -1.46
TRAPPC12-201ENST00000324266 KRTAP12-4P60329 112 aa5.9□□□□□ -1.47
TRAPPC12-201ENST00000324266 MT1GP13640 62 aa5.83□□□□□ -1.48
TRAPPC12-201ENST00000324266 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.81□□□□□ -1.48
TRAPPC12-201ENST00000324266 SPRR2FQ96RM1 72 aa5.79□□□□□ -1.48
TRAPPC12-201ENST00000324266 MT1MQ8N339 61 aa5.73□□□□□ -1.49
TRAPPC12-201ENST00000324266 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
TRAPPC12-201ENST00000324266 KRTAP19-3Q7Z4W3 81 aa5.69□□□□□ -1.5
TRAPPC12-201ENST00000324266 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
TRAPPC12-201ENST00000324266 KRTAP5-9P26371 169 aa5.68□□□□□ -1.5
TRAPPC12-201ENST00000324266 KRTAP6-3Q3LI67 103 aa5.6□□□□□ -1.51
TRAPPC12-201ENST00000324266 LCE1AQ5T7P2 110 aa5.52□□□□□ -1.53
TRAPPC12-201ENST00000324266 KRTAP9-7A8MTY7 169 aa5.51□□□□□ -1.53
TRAPPC12-201ENST00000324266 LCE5AQ5TCM9 118 aa5.5□□□□□ -1.53
TRAPPC12-201ENST00000324266 SPRR2EP22531 72 aa5.49□□□□□ -1.53
TRAPPC12-201ENST00000324266 SPRR2BP35325 72 aa5.49□□□□□ -1.53
TRAPPC12-201ENST00000324266 SPRR2AP35326 72 aa5.49□□□□□ -1.53
TRAPPC12-201ENST00000324266 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
TRAPPC12-201ENST00000324266 LCE3BQ5TA77 95 aa5.43□□□□□ -1.54
TRAPPC12-201ENST00000324266 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
TRAPPC12-201ENST00000324266 PRM1P04553 51 aa5.36□□□□□ -1.55
TRAPPC12-201ENST00000324266 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
TRAPPC12-201ENST00000324266 NEBP20929 6669 aa5.32□□□□□ -1.56
TRAPPC12-201ENST00000324266 SPRR2DP22532 72 aa5.28□□□□□ -1.56
TRAPPC12-201ENST00000324266 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
TRAPPC12-201ENST00000324266 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC12-201ENST00000324266 MT1AP04731 61 aa5.17□□□□□ -1.58
TRAPPC12-201ENST00000324266 LCE3EQ5T5B0 92 aa5.12□□□□□ -1.59
TRAPPC12-201ENST00000324266 LCE3DQ9BYE3 92 aa5.09□□□□□ -1.59
TRAPPC12-201ENST00000324266 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
TRAPPC12-201ENST00000324266 KRTAP6-2Q3LI66 62 aa4.88□□□□□ -1.63
TRAPPC12-201ENST00000324266 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
TRAPPC12-201ENST00000324266 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
TRAPPC12-201ENST00000324266 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
TRAPPC12-201ENST00000324266 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
TRAPPC12-201ENST00000324266 KRTAP5-4Q6L8H1 288 aa4.72□□□□□ -1.65
TRAPPC12-201ENST00000324266 MT4P47944 62 aa4.65□□□□□ -1.66
TRAPPC12-201ENST00000324266 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
TRAPPC12-201ENST00000324266 KRTAP4-6Q9BYQ5 205 aa4.61□□□□□ -1.67
TRAPPC12-201ENST00000324266 MT3P25713 68 aa4.6□□□□□ -1.67
TRAPPC12-201ENST00000324266 HMCN1Q96RW7 5635 aa4.56□□□□□ -1.68
TRAPPC12-201ENST00000324266 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
TRAPPC12-201ENST00000324266 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
TRAPPC12-201ENST00000324266 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
TRAPPC12-201ENST00000324266 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
TRAPPC12-201ENST00000324266 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
TRAPPC12-201ENST00000324266 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
TRAPPC12-201ENST00000324266 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
TRAPPC12-201ENST00000324266 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
TRAPPC12-201ENST00000324266 KRTAP5-10Q6L8G5 202 aa3.78□□□□□ -1.8
TRAPPC12-201ENST00000324266 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
TRAPPC12-201ENST00000324266 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
TRAPPC12-201ENST00000324266 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
TRAPPC12-201ENST00000324266 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
TRAPPC12-201ENST00000324266 KRTAP4-2Q9BYR5 136 aa3.56□□□□□ -1.84
TRAPPC12-201ENST00000324266 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
TRAPPC12-201ENST00000324266 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
TRAPPC12-201ENST00000324266 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
TRAPPC12-201ENST00000324266 KRTAP21-1Q3LI58 79 aa3.47□□□□□ -1.85
TRAPPC12-201ENST00000324266 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
TRAPPC12-201ENST00000324266 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC12-201ENST00000324266 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC12-201ENST00000324266 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
TRAPPC12-201ENST00000324266 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
TRAPPC12-201ENST00000324266 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
TRAPPC12-201ENST00000324266 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
TRAPPC12-201ENST00000324266 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
TRAPPC12-201ENST00000324266 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms