RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
SEC24A-201ENST00000322887 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
SEC24A-201ENST00000322887 KRTAP9-7A8MTY7 169 aa4.24□□□□□ -1.73
SEC24A-201ENST00000322887 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
SEC24A-201ENST00000322887 SYNE2Q8WXH0 6885 aaKnown RBP4.22□□□□□ -1.73
SEC24A-201ENST00000322887 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
SEC24A-201ENST00000322887 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
SEC24A-201ENST00000322887 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
SEC24A-201ENST00000322887 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
SEC24A-201ENST00000322887 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
SEC24A-201ENST00000322887 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.74
SEC24A-201ENST00000322887 SPRR2FQ96RM1 72 aa4.14□□□□□ -1.75
SEC24A-201ENST00000322887 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
SEC24A-201ENST00000322887 MT1LQ93083 61 aa4.09□□□□□ -1.75
SEC24A-201ENST00000322887 MT1EP04732 61 aa4.08□□□□□ -1.76
SEC24A-201ENST00000322887 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
SEC24A-201ENST00000322887 MT1GP13640 62 aa4□□□□□ -1.77
SEC24A-201ENST00000322887 SPRR2EP22531 72 aa4□□□□□ -1.77
SEC24A-201ENST00000322887 SPRR2BP35325 72 aa4□□□□□ -1.77
SEC24A-201ENST00000322887 SPRR2AP35326 72 aa4□□□□□ -1.77
SEC24A-201ENST00000322887 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
SEC24A-201ENST00000322887 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
SEC24A-201ENST00000322887 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
SEC24A-201ENST00000322887 NEBP20929 6669 aa3.98□□□□□ -1.77
SEC24A-201ENST00000322887 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.78
SEC24A-201ENST00000322887 MDN1Q9NU22 5596 aa3.94□□□□□ -1.78
SEC24A-201ENST00000322887 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
SEC24A-201ENST00000322887 SPRR2DP22532 72 aa3.86□□□□□ -1.79
SEC24A-201ENST00000322887 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
SEC24A-201ENST00000322887 MT1MQ8N339 61 aa3.86□□□□□ -1.79
SEC24A-201ENST00000322887 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
SEC24A-201ENST00000322887 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
SEC24A-201ENST00000322887 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
SEC24A-201ENST00000322887 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
SEC24A-201ENST00000322887 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
SEC24A-201ENST00000322887 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
SEC24A-201ENST00000322887 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
SEC24A-201ENST00000322887 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
SEC24A-201ENST00000322887 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
SEC24A-201ENST00000322887 PRM1P04553 51 aa3.49□□□□□ -1.85
SEC24A-201ENST00000322887 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
SEC24A-201ENST00000322887 MT1AP04731 61 aa3.4□□□□□ -1.87
SEC24A-201ENST00000322887 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
SEC24A-201ENST00000322887 LCE1DQ5T752 114 aa3.34□□□□□ -1.88
SEC24A-201ENST00000322887 MT4P47944 62 aa3.31□□□□□ -1.88
SEC24A-201ENST00000322887 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
SEC24A-201ENST00000322887 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
SEC24A-201ENST00000322887 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
SEC24A-201ENST00000322887 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
SEC24A-201ENST00000322887 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
SEC24A-201ENST00000322887 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
SEC24A-201ENST00000322887 MT3P25713 68 aa3.09□□□□□ -1.91
SEC24A-201ENST00000322887 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
SEC24A-201ENST00000322887 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
SEC24A-201ENST00000322887 KRTAP9-9Q9BYP9 154 aa3□□□□□ -1.93
SEC24A-201ENST00000322887 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
SEC24A-201ENST00000322887 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
SEC24A-201ENST00000322887 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
SEC24A-201ENST00000322887 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
SEC24A-201ENST00000322887 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
SEC24A-201ENST00000322887 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
SEC24A-201ENST00000322887 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
SEC24A-201ENST00000322887 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
SEC24A-201ENST00000322887 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
SEC24A-201ENST00000322887 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
SEC24A-201ENST00000322887 LCE1CQ5T751 118 aa2.58□□□□□ -2
SEC24A-201ENST00000322887 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
SEC24A-201ENST00000322887 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
SEC24A-201ENST00000322887 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
SEC24A-201ENST00000322887 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
SEC24A-201ENST00000322887 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
SEC24A-201ENST00000322887 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
SEC24A-201ENST00000322887 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
SEC24A-201ENST00000322887 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
SEC24A-201ENST00000322887 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
SEC24A-201ENST00000322887 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
SEC24A-201ENST00000322887 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms