RNA–Protein interactions for RNA: ENST00000321256.9

NCBP2-201, Transcript of nuclear cap binding protein subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCBP2, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-201ENST00000321256 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
NCBP2-201ENST00000321256 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
NCBP2-201ENST00000321256 MACF1Q9UPN3 7388 aaKnown RBP4.54□□□□□ -1.68
NCBP2-201ENST00000321256 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
NCBP2-201ENST00000321256 MT1EP04732 61 aa4.48□□□□□ -1.69
NCBP2-201ENST00000321256 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
NCBP2-201ENST00000321256 MT1LQ93083 61 aa4.43□□□□□ -1.7
NCBP2-201ENST00000321256 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
NCBP2-201ENST00000321256 INE1O15225 51 aa4.4□□□□□ -1.7
NCBP2-201ENST00000321256 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
NCBP2-201ENST00000321256 KRTAP9-7A8MTY7 169 aa4.37□□□□□ -1.71
NCBP2-201ENST00000321256 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
NCBP2-201ENST00000321256 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
NCBP2-201ENST00000321256 LCE1DQ5T752 114 aa4.34□□□□□ -1.71
NCBP2-201ENST00000321256 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
NCBP2-201ENST00000321256 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
NCBP2-201ENST00000321256 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
NCBP2-201ENST00000321256 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
NCBP2-201ENST00000321256 KRTAP4-9Q9BYQ8 210 aa4.24□□□□□ -1.73
NCBP2-201ENST00000321256 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
NCBP2-201ENST00000321256 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
NCBP2-201ENST00000321256 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
NCBP2-201ENST00000321256 MDN1Q9NU22 5596 aa4.21□□□□□ -1.73
NCBP2-201ENST00000321256 MT1GP13640 62 aa4.21□□□□□ -1.74
NCBP2-201ENST00000321256 MT1MQ8N339 61 aa4.2□□□□□ -1.74
NCBP2-201ENST00000321256 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
NCBP2-201ENST00000321256 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
NCBP2-201ENST00000321256 NEBP20929 6669 aa4.14□□□□□ -1.75
NCBP2-201ENST00000321256 SPRR2EP22531 72 aa4.12□□□□□ -1.75
NCBP2-201ENST00000321256 SPRR2BP35325 72 aa4.12□□□□□ -1.75
NCBP2-201ENST00000321256 SPRR2AP35326 72 aa4.12□□□□□ -1.75
NCBP2-201ENST00000321256 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
NCBP2-201ENST00000321256 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
NCBP2-201ENST00000321256 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
NCBP2-201ENST00000321256 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
NCBP2-201ENST00000321256 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
NCBP2-201ENST00000321256 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
NCBP2-201ENST00000321256 SPRR2DP22532 72 aa3.97□□□□□ -1.77
NCBP2-201ENST00000321256 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
NCBP2-201ENST00000321256 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
NCBP2-201ENST00000321256 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
NCBP2-201ENST00000321256 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
NCBP2-201ENST00000321256 MT1AP04731 61 aa3.72□□□□□ -1.81
NCBP2-201ENST00000321256 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
NCBP2-201ENST00000321256 KRTAP5-4Q6L8H1 288 aa3.52□□□□□ -1.85
NCBP2-201ENST00000321256 KRTAP12-4P60329 112 aa3.49□□□□□ -1.85
NCBP2-201ENST00000321256 MT4P47944 62 aa3.44□□□□□ -1.86
NCBP2-201ENST00000321256 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
NCBP2-201ENST00000321256 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
NCBP2-201ENST00000321256 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
NCBP2-201ENST00000321256 MT3P25713 68 aa3.36□□□□□ -1.87
NCBP2-201ENST00000321256 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.88
NCBP2-201ENST00000321256 OBSCNQ5VST9 7968 aa3.33□□□□□ -1.88
NCBP2-201ENST00000321256 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
NCBP2-201ENST00000321256 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
NCBP2-201ENST00000321256 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
NCBP2-201ENST00000321256 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
NCBP2-201ENST00000321256 PRM1P04553 51 aa3.08□□□□□ -1.92
NCBP2-201ENST00000321256 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
NCBP2-201ENST00000321256 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
NCBP2-201ENST00000321256 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.96
NCBP2-201ENST00000321256 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
NCBP2-201ENST00000321256 MUC5ACP98088 5654 aa2.81□□□□□ -1.96
NCBP2-201ENST00000321256 KRTAP5-11Q6L8G4 156 aa2.81□□□□□ -1.96
NCBP2-201ENST00000321256 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
NCBP2-201ENST00000321256 LCE1BQ5T7P3 118 aa2.78□□□□□ -1.96
NCBP2-201ENST00000321256 KRTAP5-1Q6L8H4 278 aa2.76□□□□□ -1.97
NCBP2-201ENST00000321256 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
NCBP2-201ENST00000321256 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
NCBP2-201ENST00000321256 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
NCBP2-201ENST00000321256 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
NCBP2-201ENST00000321256 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
NCBP2-201ENST00000321256 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
NCBP2-201ENST00000321256 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
NCBP2-201ENST00000321256 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
NCBP2-201ENST00000321256 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
NCBP2-201ENST00000321256 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 139.4 ms