RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 Q1T7F1 81 aa10.4□□□□□ -0.74
SYNGR1-202ENST00000318801 MT1LQ93083 61 aa10.37□□□□□ -0.75
SYNGR1-202ENST00000318801 MT1MQ8N339 61 aa10.29□□□□□ -0.76
SYNGR1-202ENST00000318801 KRTAP25-1Q3LHN0 102 aa10.26□□□□□ -0.77
SYNGR1-202ENST00000318801 KRTAP12-3P60328 96 aa10.21□□□□□ -0.78
SYNGR1-202ENST00000318801 A6NED7 52 aa10.13□□□□□ -0.79
SYNGR1-202ENST00000318801 KRTAP4-9Q9BYQ8 210 aa10.04□□□□□ -0.8
SYNGR1-202ENST00000318801 RPS28P62857 69 aaKnown RBP10.01□□□□□ -0.81
SYNGR1-202ENST00000318801 KRTAP4-3Q9BYR4 195 aa9.98□□□□□ -0.81
SYNGR1-202ENST00000318801 LCE4AQ5TA78 99 aa9.95□□□□□ -0.82
SYNGR1-202ENST00000318801 PCP4P48539 62 aa9.93□□□□□ -0.82
SYNGR1-202ENST00000318801 KRTAP23-1A1A580 65 aa9.88□□□□□ -0.83
SYNGR1-202ENST00000318801 CDC42SE1Q9NRR8 79 aa9.85□□□□□ -0.83
SYNGR1-202ENST00000318801 LCE1DQ5T752 114 aa9.83□□□□□ -0.84
SYNGR1-202ENST00000318801 KRTAP4-7Q9BYR0 210 aa9.81□□□□□ -0.84
SYNGR1-202ENST00000318801 MT4P47944 62 aa9.78□□□□□ -0.84
SYNGR1-202ENST00000318801 KRTAP19-4Q3LI73 84 aa9.76□□□□□ -0.85
SYNGR1-202ENST00000318801 KRTAP5-4Q6L8H1 288 aa9.7□□□□□ -0.86
SYNGR1-202ENST00000318801 ROMO1P60602 79 aa9.66□□□□□ -0.86
SYNGR1-202ENST00000318801 HMCN1Q96RW7 5635 aa9.64□□□□□ -0.87
SYNGR1-202ENST00000318801 GPR98Q8WXG9 6306 aa9.62□□□□□ -0.87
SYNGR1-202ENST00000318801 KRTAP15-1Q3LI76 137 aa9.61□□□□□ -0.87
SYNGR1-202ENST00000318801 KRTAP4-6Q9BYQ5 205 aa9.47□□□□□ -0.89
SYNGR1-202ENST00000318801 LCE3CQ5T5A8 94 aa9.41□□□□□ -0.9
SYNGR1-202ENST00000318801 KRTAP5-5Q701N2 237 aaPredicted RBP9.37□□□□□ -0.91
SYNGR1-202ENST00000318801 LOC100996750A0A140TA64 210 aa9.3□□□□□ -0.92
SYNGR1-202ENST00000318801 KRTAP12-4P60329 112 aa9.28□□□□□ -0.92
SYNGR1-202ENST00000318801 AHNAK2Q8IVF2 5795 aa9.2□□□□□ -0.94
SYNGR1-202ENST00000318801 SPRR5A0A1B0GTR4 108 aa9.2□□□□□ -0.94
SYNGR1-202ENST00000318801 KRTAP20-2Q3LI61 65 aa9.16□□□□□ -0.94
SYNGR1-202ENST00000318801 KRTAP5-10Q6L8G5 202 aa9.02□□□□□ -0.97
SYNGR1-202ENST00000318801 SYNE1Q8NF91 8797 aaKnown RBP8.95□□□□□ -0.98
SYNGR1-202ENST00000318801 KRTAP5-3Q6L8H2 238 aa8.89□□□□□ -0.99
SYNGR1-202ENST00000318801 MT1AP04731 61 aa8.85□□□□□ -0.99
SYNGR1-202ENST00000318801 BRK1Q8WUW1 75 aa8.82□□□□□ -1
SYNGR1-202ENST00000318801 KRTAP6-1Q3LI64 71 aa8.74□□□□□ -1.01
SYNGR1-202ENST00000318801 KRTAP9-6A8MVA2 160 aa8.73□□□□□ -1.01
SYNGR1-202ENST00000318801 KRTAP5-7Q6L8G8 165 aa8.69□□□□□ -1.02
SYNGR1-202ENST00000318801 KRTAP9-4Q9BYQ2 154 aa8.56□□□□□ -1.04
SYNGR1-202ENST00000318801 KRTAP5-2Q701N4 177 aa8.51□□□□□ -1.05
SYNGR1-202ENST00000318801 KRTAP6-2Q3LI66 62 aa8.36□□□□□ -1.07
SYNGR1-202ENST00000318801 KRTAP4-11Q9BYQ6 195 aa8.36□□□□□ -1.07
SYNGR1-202ENST00000318801 PMAIP1Q13794 54 aa8.34□□□□□ -1.07
SYNGR1-202ENST00000318801 MT3P25713 68 aa8.15□□□□□ -1.1
SYNGR1-202ENST00000318801 OBSCNQ5VST9 7968 aa8.04□□□□□ -1.12
SYNGR1-202ENST00000318801 KRTAP5-8O75690 187 aa8.02□□□□□ -1.13
SYNGR1-202ENST00000318801 PRAC1Q96KF2 57 aa7.85□□□□□ -1.15
SYNGR1-202ENST00000318801 PRO0628Q9UI54 55 aa7.74□□□□□ -1.17
SYNGR1-202ENST00000318801 KRTAP9-9Q9BYP9 154 aa7.71□□□□□ -1.18
SYNGR1-202ENST00000318801 KRTAP5-1Q6L8H4 278 aa7.59□□□□□ -1.19
SYNGR1-202ENST00000318801 MUC5BQ9HC84 5762 aaPredicted RBP7.56□□□□□ -1.2
SYNGR1-202ENST00000318801 MUC5ACP98088 5654 aa7.54□□□□□ -1.2
SYNGR1-202ENST00000318801 AHNAKQ09666 5890 aaKnown RBP7.53□□□□□ -1.2
SYNGR1-202ENST00000318801 LCE1EQ5T753 118 aa7.44□□□□□ -1.22
SYNGR1-202ENST00000318801 KTN1-AS1Q86SY8 53 aa7.38□□□□□ -1.23
SYNGR1-202ENST00000318801 SVIPQ8NHG7 77 aa7.15□□□□□ -1.26
SYNGR1-202ENST00000318801 LCE1BQ5T7P3 118 aa6.98□□□□□ -1.29
SYNGR1-202ENST00000318801 KRTAP4-2Q9BYR5 136 aa6.9□□□□□ -1.31
SYNGR1-202ENST00000318801 LCE1CQ5T751 118 aa6.89□□□□□ -1.31
SYNGR1-202ENST00000318801 LUZP6Q538Z0 58 aa6.86□□□□□ -1.31
SYNGR1-202ENST00000318801 LCE3DQ9BYE3 92 aa6.86□□□□□ -1.31
SYNGR1-202ENST00000318801 LCE3EQ5T5B0 92 aa6.47□□□□□ -1.37
SYNGR1-202ENST00000318801 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.25□□□□□ -1.41
SYNGR1-202ENST00000318801 KRTAP4-12Q9BQ66 201 aa6.23□□□□□ -1.41
SYNGR1-202ENST00000318801 KRTAP5-11Q6L8G4 156 aa6.19□□□□□ -1.42
SYNGR1-202ENST00000318801 LCE1FQ5T754 118 aa6.06□□□□□ -1.44
SYNGR1-202ENST00000318801 KRTAP21-2Q3LI59 83 aa5.75□□□□□ -1.49
SYNGR1-202ENST00000318801 H3BS24 57 aa5.57□□□□□ -1.52
SYNGR1-202ENST00000318801 NDUFAF8A1L188 74 aa5.43□□□□□ -1.54
SYNGR1-202ENST00000318801 PHGR1C9JFL3 82 aa5.35□□□□□ -1.55
SYNGR1-202ENST00000318801 KRTAP4-4Q9BYR3 166 aa5.24□□□□□ -1.57
SYNGR1-202ENST00000318801 A0A0A0MQY5 61 aa5.15□□□□□ -1.59
SYNGR1-202ENST00000318801 MUC19Q7Z5P9 8384 aa4.93□□□□□ -1.62
SYNGR1-202ENST00000318801 PRM1P04553 51 aa4.91□□□□□ -1.62
SYNGR1-202ENST00000318801 INE1O15225 51 aa4.45□□□□□ -1.7
SYNGR1-202ENST00000318801 KRTAP21-1Q3LI58 79 aa4.05□□□□□ -1.76
SYNGR1-202ENST00000318801 MUC16Q8WXI7 14507 aa3.46□□□□□ -1.86
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms