RNA–Protein interactions for RNA: ENST00000317578.6

SIX5-201, Transcript of SIX homeobox 5, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SIX5, Length 3,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5-201ENST00000317578 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
SIX5-201ENST00000317578 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
SIX5-201ENST00000317578 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
SIX5-201ENST00000317578 KRTAP2-1Q9BYU5 128 aa6.64□□□□□ -1.35
SIX5-201ENST00000317578 KRTAP4-3Q9BYR4 195 aa6.59□□□□□ -1.35
SIX5-201ENST00000317578 SPRR2FQ96RM1 72 aa6.58□□□□□ -1.36
SIX5-201ENST00000317578 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
SIX5-201ENST00000317578 MT1EP04732 61 aa6.51□□□□□ -1.37
SIX5-201ENST00000317578 MT1LQ93083 61 aa6.48□□□□□ -1.37
SIX5-201ENST00000317578 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
SIX5-201ENST00000317578 KRTAP12-4P60329 112 aa6.46□□□□□ -1.38
SIX5-201ENST00000317578 MT1GP13640 62 aa6.42□□□□□ -1.38
SIX5-201ENST00000317578 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
SIX5-201ENST00000317578 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
SIX5-201ENST00000317578 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
SIX5-201ENST00000317578 KRTAP19-3Q7Z4W3 81 aa6.19□□□□□ -1.42
SIX5-201ENST00000317578 MT1MQ8N339 61 aa6.15□□□□□ -1.42
SIX5-201ENST00000317578 KRTAP4-9Q9BYQ8 210 aa6.04□□□□□ -1.44
SIX5-201ENST00000317578 SPRR2EP22531 72 aa6□□□□□ -1.45
SIX5-201ENST00000317578 SPRR2BP35325 72 aa6□□□□□ -1.45
SIX5-201ENST00000317578 SPRR2AP35326 72 aa6□□□□□ -1.45
SIX5-201ENST00000317578 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
SIX5-201ENST00000317578 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
SIX5-201ENST00000317578 KRTAP9-7A8MTY7 169 aa5.82□□□□□ -1.48
SIX5-201ENST00000317578 PRM1P04553 51 aa5.81□□□□□ -1.48
SIX5-201ENST00000317578 KRTAP19-4Q3LI73 84 aa5.8□□□□□ -1.48
SIX5-201ENST00000317578 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
SIX5-201ENST00000317578 SPRR2DP22532 72 aa5.71□□□□□ -1.5
SIX5-201ENST00000317578 KRTAP6-1Q3LI64 71 aa5.63□□□□□ -1.51
SIX5-201ENST00000317578 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
SIX5-201ENST00000317578 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.62□□□□□ -1.51
SIX5-201ENST00000317578 LCE3DQ9BYE3 92 aa5.61□□□□□ -1.51
SIX5-201ENST00000317578 LCE3EQ5T5B0 92 aa5.58□□□□□ -1.52
SIX5-201ENST00000317578 KRTAP6-3Q3LI67 103 aa5.51□□□□□ -1.53
SIX5-201ENST00000317578 KRTAP5-9P26371 169 aa5.48□□□□□ -1.53
SIX5-201ENST00000317578 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
SIX5-201ENST00000317578 MT1AP04731 61 aa5.36□□□□□ -1.55
SIX5-201ENST00000317578 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
SIX5-201ENST00000317578 MT4P47944 62 aa5.33□□□□□ -1.56
SIX5-201ENST00000317578 KRTAP6-2Q3LI66 62 aa5.29□□□□□ -1.56
SIX5-201ENST00000317578 KRTAP2-2Q9BYT5 123 aa5.28□□□□□ -1.56
SIX5-201ENST00000317578 NEBP20929 6669 aa5.14□□□□□ -1.59
SIX5-201ENST00000317578 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
SIX5-201ENST00000317578 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
SIX5-201ENST00000317578 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
SIX5-201ENST00000317578 MUC19Q7Z5P9 8384 aa5.01□□□□□ -1.61
SIX5-201ENST00000317578 MT3P25713 68 aa4.98□□□□□ -1.61
SIX5-201ENST00000317578 HMCN1Q96RW7 5635 aa4.84□□□□□ -1.64
SIX5-201ENST00000317578 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
SIX5-201ENST00000317578 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
SIX5-201ENST00000317578 LCE1FQ5T754 118 aa4.62□□□□□ -1.67
SIX5-201ENST00000317578 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
SIX5-201ENST00000317578 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
SIX5-201ENST00000317578 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
SIX5-201ENST00000317578 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
SIX5-201ENST00000317578 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
SIX5-201ENST00000317578 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
SIX5-201ENST00000317578 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
SIX5-201ENST00000317578 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
SIX5-201ENST00000317578 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
SIX5-201ENST00000317578 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
SIX5-201ENST00000317578 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
SIX5-201ENST00000317578 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
SIX5-201ENST00000317578 KRTAP4-12Q9BQ66 201 aa3.77□□□□□ -1.81
SIX5-201ENST00000317578 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
SIX5-201ENST00000317578 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
SIX5-201ENST00000317578 KRTAP5-8O75690 187 aa3.68□□□□□ -1.82
SIX5-201ENST00000317578 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
SIX5-201ENST00000317578 KRTAP21-1Q3LI58 79 aa3.45□□□□□ -1.86
SIX5-201ENST00000317578 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
SIX5-201ENST00000317578 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
SIX5-201ENST00000317578 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
SIX5-201ENST00000317578 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
SIX5-201ENST00000317578 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
SIX5-201ENST00000317578 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.91
SIX5-201ENST00000317578 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
SIX5-201ENST00000317578 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms