RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 MT1FP04733 61 aa1.59□□□□□ -2.15
CNOT1-201ENST00000317147 MT1HP80294 61 aa1.58□□□□□ -2.16
CNOT1-201ENST00000317147 LCE2AQ5TA79 106 aaPredicted RBP1.56□□□□□ -2.16
CNOT1-201ENST00000317147 MT1XP80297 61 aa1.56□□□□□ -2.16
CNOT1-201ENST00000317147 KRTAP9-8Q9BYQ0 159 aa1.56□□□□□ -2.16
CNOT1-201ENST00000317147 MT1LQ93083 61 aa1.54□□□□□ -2.16
CNOT1-201ENST00000317147 SYNE2Q8WXH0 6885 aaKnown RBP1.54□□□□□ -2.16
CNOT1-201ENST00000317147 KRTAP2-3P0C7H8 128 aa1.53□□□□□ -2.16
CNOT1-201ENST00000317147 KRTAP2-4Q9BYR9 128 aa1.53□□□□□ -2.16
CNOT1-201ENST00000317147 KRTAP2-1Q9BYU5 128 aa1.53□□□□□ -2.16
CNOT1-201ENST00000317147 MT1EP04732 61 aa1.52□□□□□ -2.17
CNOT1-201ENST00000317147 MT1GP13640 62 aa1.51□□□□□ -2.17
CNOT1-201ENST00000317147 KRTAP4-8A0A0G2JLE6 195 aa1.51□□□□□ -2.17
CNOT1-201ENST00000317147 KRTAP4-8Q9BYQ9 185 aa1.51□□□□□ -2.17
CNOT1-201ENST00000317147 LCE3EQ5T5B0 92 aa1.51□□□□□ -2.17
CNOT1-201ENST00000317147 MT1BP07438 61 aa1.49□□□□□ -2.17
CNOT1-201ENST00000317147 LCE3DQ9BYE3 92 aa1.49□□□□□ -2.17
CNOT1-201ENST00000317147 KRTAP4-7Q9BYR0 210 aa1.47□□□□□ -2.17
CNOT1-201ENST00000317147 MT1AP04731 61 aa1.46□□□□□ -2.18
CNOT1-201ENST00000317147 KRTAP9-3Q9BYQ3 159 aa1.46□□□□□ -2.18
CNOT1-201ENST00000317147 KRTAP2-2Q9BYT5 123 aa1.45□□□□□ -2.18
CNOT1-201ENST00000317147 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
CNOT1-201ENST00000317147 GPR98Q8WXG9 6306 aa1.45□□□□□ -2.18
CNOT1-201ENST00000317147 KRTAP20-1Q3LI63 56 aa1.44□□□□□ -2.18
CNOT1-201ENST00000317147 LCE3BQ5TA77 95 aa1.43□□□□□ -2.18
CNOT1-201ENST00000317147 KRTAP9-6A8MVA2 160 aa1.42□□□□□ -2.18
CNOT1-201ENST00000317147 KRTAP9-7A8MTY7 169 aa1.42□□□□□ -2.18
CNOT1-201ENST00000317147 KRTAP19-3Q7Z4W3 81 aa1.41□□□□□ -2.18
CNOT1-201ENST00000317147 LOC100996750A0A140TA64 210 aa1.38□□□□□ -2.19
CNOT1-201ENST00000317147 MT1MQ8N339 61 aa1.38□□□□□ -2.19
CNOT1-201ENST00000317147 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.36□□□□□ -2.19
CNOT1-201ENST00000317147 KRTAP19-7Q3SYF9 63 aa1.35□□□□□ -2.19
CNOT1-201ENST00000317147 KRTAP4-3Q9BYR4 195 aa1.35□□□□□ -2.19
CNOT1-201ENST00000317147 PRM1P04553 51 aa1.33□□□□□ -2.2
CNOT1-201ENST00000317147 KRTAP19-6Q3LI70 58 aa1.33□□□□□ -2.2
CNOT1-201ENST00000317147 LCE5AQ5TCM9 118 aa1.32□□□□□ -2.2
CNOT1-201ENST00000317147 KRTAP4-6Q9BYQ5 205 aa1.32□□□□□ -2.2
CNOT1-201ENST00000317147 KRTAP4-9Q9BYQ8 210 aa1.32□□□□□ -2.2
CNOT1-201ENST00000317147 MT4P47944 62 aa1.31□□□□□ -2.2
CNOT1-201ENST00000317147 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
CNOT1-201ENST00000317147 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
CNOT1-201ENST00000317147 LCE4AQ5TA78 99 aa1.28□□□□□ -2.2
CNOT1-201ENST00000317147 NEBP20929 6669 aa1.28□□□□□ -2.2
CNOT1-201ENST00000317147 KRTAP6-3Q3LI67 103 aa1.26□□□□□ -2.21
CNOT1-201ENST00000317147 LCE1AQ5T7P2 110 aa1.25□□□□□ -2.21
CNOT1-201ENST00000317147 LCE1DQ5T752 114 aa1.24□□□□□ -2.21
CNOT1-201ENST00000317147 KRTAP9-9Q9BYP9 154 aa1.24□□□□□ -2.21
CNOT1-201ENST00000317147 KRTAP5-9P26371 169 aa1.23□□□□□ -2.21
CNOT1-201ENST00000317147 LCE1BQ5T7P3 118 aa1.23□□□□□ -2.21
CNOT1-201ENST00000317147 LCE1CQ5T751 118 aa1.2□□□□□ -2.22
CNOT1-201ENST00000317147 LCE1EQ5T753 118 aa1.2□□□□□ -2.22
CNOT1-201ENST00000317147 LCE1FQ5T754 118 aa1.2□□□□□ -2.22
CNOT1-201ENST00000317147 KRTAP6-2Q3LI66 62 aa1.19□□□□□ -2.22
CNOT1-201ENST00000317147 KRTAP9-4Q9BYQ2 154 aa1.19□□□□□ -2.22
CNOT1-201ENST00000317147 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
CNOT1-201ENST00000317147 HMCN1Q96RW7 5635 aa1.18□□□□□ -2.22
CNOT1-201ENST00000317147 KRTAP6-1Q3LI64 71 aa1.18□□□□□ -2.22
CNOT1-201ENST00000317147 MUC5ACP98088 5654 aa1.12□□□□□ -2.23
CNOT1-201ENST00000317147 KRTAP4-12Q9BQ66 201 aa1.12□□□□□ -2.23
CNOT1-201ENST00000317147 KRTAP5-5Q701N2 237 aaPredicted RBP1.09□□□□□ -2.24
CNOT1-201ENST00000317147 KRTAP4-2Q9BYR5 136 aa1.07□□□□□ -2.24
CNOT1-201ENST00000317147 KRTAP4-11Q9BYQ6 195 aa1.06□□□□□ -2.24
CNOT1-201ENST00000317147 KRTAP5-4Q6L8H1 288 aa1.05□□□□□ -2.24
CNOT1-201ENST00000317147 KRTAP5-3Q6L8H2 238 aa1.01□□□□□ -2.25
CNOT1-201ENST00000317147 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
CNOT1-201ENST00000317147 KRTAP5-2Q701N4 177 aa0.97□□□□□ -2.25
CNOT1-201ENST00000317147 KRTAP5-7Q6L8G8 165 aa0.96□□□□□ -2.26
CNOT1-201ENST00000317147 KRTAP20-2Q3LI61 65 aa0.88□□□□□ -2.27
CNOT1-201ENST00000317147 KRTAP4-4Q9BYR3 166 aa0.84□□□□□ -2.27
CNOT1-201ENST00000317147 KRTAP5-8O75690 187 aa0.84□□□□□ -2.28
CNOT1-201ENST00000317147 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.83□□□□□ -2.28
CNOT1-201ENST00000317147 KRTAP5-1Q6L8H4 278 aa0.82□□□□□ -2.28
CNOT1-201ENST00000317147 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
CNOT1-201ENST00000317147 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
CNOT1-201ENST00000317147 KRTAP5-11Q6L8G4 156 aa0.74□□□□□ -2.29
CNOT1-201ENST00000317147 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
CNOT1-201ENST00000317147 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 95.4 ms