RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 KRTAP19-6Q3LI70 58 aa5.19□□□□□ -1.58
TFE3-201ENST00000315869 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
TFE3-201ENST00000315869 MT1LQ93083 61 aa5.07□□□□□ -1.6
TFE3-201ENST00000315869 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
TFE3-201ENST00000315869 LCE2DQ5TA82 110 aaPredicted RBP5.06□□□□□ -1.6
TFE3-201ENST00000315869 KRTAP9-2Q9BYQ4 174 aa5.05□□□□□ -1.6
TFE3-201ENST00000315869 MT1EP04732 61 aa5.04□□□□□ -1.6
TFE3-201ENST00000315869 MDN1Q9NU22 5596 aa5.01□□□□□ -1.61
TFE3-201ENST00000315869 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
TFE3-201ENST00000315869 KRTAP2-3P0C7H8 128 aa4.98□□□□□ -1.61
TFE3-201ENST00000315869 KRTAP2-4Q9BYR9 128 aa4.98□□□□□ -1.61
TFE3-201ENST00000315869 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
TFE3-201ENST00000315869 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.62
TFE3-201ENST00000315869 MT1GP13640 62 aa4.93□□□□□ -1.62
TFE3-201ENST00000315869 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
TFE3-201ENST00000315869 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
TFE3-201ENST00000315869 MT1MQ8N339 61 aa4.74□□□□□ -1.65
TFE3-201ENST00000315869 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
TFE3-201ENST00000315869 LCE3BQ5TA77 95 aa4.65□□□□□ -1.67
TFE3-201ENST00000315869 SPRR2EP22531 72 aa4.63□□□□□ -1.67
TFE3-201ENST00000315869 SPRR2BP35325 72 aa4.63□□□□□ -1.67
TFE3-201ENST00000315869 SPRR2AP35326 72 aa4.63□□□□□ -1.67
TFE3-201ENST00000315869 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
TFE3-201ENST00000315869 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
TFE3-201ENST00000315869 LCE1AQ5T7P2 110 aa4.54□□□□□ -1.68
TFE3-201ENST00000315869 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
TFE3-201ENST00000315869 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
TFE3-201ENST00000315869 KRTAP5-9P26371 169 aa4.45□□□□□ -1.7
TFE3-201ENST00000315869 SPRR2DP22532 72 aa4.41□□□□□ -1.7
TFE3-201ENST00000315869 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
TFE3-201ENST00000315869 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
TFE3-201ENST00000315869 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
TFE3-201ENST00000315869 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
TFE3-201ENST00000315869 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
TFE3-201ENST00000315869 MT1AP04731 61 aa4.22□□□□□ -1.73
TFE3-201ENST00000315869 PRM1P04553 51 aa4.18□□□□□ -1.74
TFE3-201ENST00000315869 MT4P47944 62 aa4.17□□□□□ -1.74
TFE3-201ENST00000315869 NEBP20929 6669 aa4.13□□□□□ -1.75
TFE3-201ENST00000315869 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
TFE3-201ENST00000315869 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
TFE3-201ENST00000315869 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
TFE3-201ENST00000315869 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
TFE3-201ENST00000315869 MT3P25713 68 aa3.86□□□□□ -1.79
TFE3-201ENST00000315869 HMCN1Q96RW7 5635 aa3.78□□□□□ -1.8
TFE3-201ENST00000315869 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
TFE3-201ENST00000315869 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
TFE3-201ENST00000315869 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
TFE3-201ENST00000315869 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
TFE3-201ENST00000315869 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
TFE3-201ENST00000315869 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
TFE3-201ENST00000315869 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
TFE3-201ENST00000315869 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
TFE3-201ENST00000315869 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
TFE3-201ENST00000315869 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
TFE3-201ENST00000315869 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
TFE3-201ENST00000315869 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
TFE3-201ENST00000315869 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
TFE3-201ENST00000315869 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
TFE3-201ENST00000315869 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
TFE3-201ENST00000315869 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
TFE3-201ENST00000315869 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
TFE3-201ENST00000315869 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
TFE3-201ENST00000315869 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
TFE3-201ENST00000315869 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
TFE3-201ENST00000315869 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
TFE3-201ENST00000315869 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
TFE3-201ENST00000315869 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
TFE3-201ENST00000315869 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
TFE3-201ENST00000315869 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.97
TFE3-201ENST00000315869 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
TFE3-201ENST00000315869 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
TFE3-201ENST00000315869 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
TFE3-201ENST00000315869 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
TFE3-201ENST00000315869 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
TFE3-201ENST00000315869 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
TFE3-201ENST00000315869 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
TFE3-201ENST00000315869 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 37.6 ms