RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 KRTAP9-6A8MVA2 160 aa5.11□□□□□ -1.59
CHFR-202ENST00000315585 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
CHFR-202ENST00000315585 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
CHFR-202ENST00000315585 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
CHFR-202ENST00000315585 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
CHFR-202ENST00000315585 KRTAP19-3Q7Z4W3 81 aa5.01□□□□□ -1.61
CHFR-202ENST00000315585 SPRR2FQ96RM1 72 aa5.01□□□□□ -1.61
CHFR-202ENST00000315585 MT1GP13640 62 aa4.99□□□□□ -1.61
CHFR-202ENST00000315585 MT1MQ8N339 61 aa4.91□□□□□ -1.62
CHFR-202ENST00000315585 KRTAP5-9P26371 169 aa4.88□□□□□ -1.63
CHFR-202ENST00000315585 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
CHFR-202ENST00000315585 KRTAP9-6A0A140TA67 174 aa4.86□□□□□ -1.63
CHFR-202ENST00000315585 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
CHFR-202ENST00000315585 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
CHFR-202ENST00000315585 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
CHFR-202ENST00000315585 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
CHFR-202ENST00000315585 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
CHFR-202ENST00000315585 KRTAP6-3Q3LI67 103 aa4.72□□□□□ -1.65
CHFR-202ENST00000315585 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
CHFR-202ENST00000315585 SPRR2EP22531 72 aa4.7□□□□□ -1.66
CHFR-202ENST00000315585 SPRR2BP35325 72 aa4.7□□□□□ -1.66
CHFR-202ENST00000315585 SPRR2AP35326 72 aa4.7□□□□□ -1.66
CHFR-202ENST00000315585 SYNE2Q8WXH0 6885 aaKnown RBP4.63□□□□□ -1.67
CHFR-202ENST00000315585 SPRR2DP22532 72 aa4.53□□□□□ -1.68
CHFR-202ENST00000315585 MDN1Q9NU22 5596 aa4.46□□□□□ -1.69
CHFR-202ENST00000315585 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
CHFR-202ENST00000315585 KRTAP9-7A8MTY7 169 aa4.42□□□□□ -1.7
CHFR-202ENST00000315585 MT1AP04731 61 aa4.42□□□□□ -1.7
CHFR-202ENST00000315585 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
CHFR-202ENST00000315585 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
CHFR-202ENST00000315585 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
CHFR-202ENST00000315585 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.72
CHFR-202ENST00000315585 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
CHFR-202ENST00000315585 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
CHFR-202ENST00000315585 NEBP20929 6669 aa4.17□□□□□ -1.74
CHFR-202ENST00000315585 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
CHFR-202ENST00000315585 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
CHFR-202ENST00000315585 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
CHFR-202ENST00000315585 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
CHFR-202ENST00000315585 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
CHFR-202ENST00000315585 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
CHFR-202ENST00000315585 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
CHFR-202ENST00000315585 MT3P25713 68 aa4.01□□□□□ -1.77
CHFR-202ENST00000315585 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
CHFR-202ENST00000315585 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
CHFR-202ENST00000315585 MT4P47944 62 aa3.91□□□□□ -1.78
CHFR-202ENST00000315585 PRM1P04553 51 aa3.87□□□□□ -1.79
CHFR-202ENST00000315585 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
CHFR-202ENST00000315585 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
CHFR-202ENST00000315585 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
CHFR-202ENST00000315585 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
CHFR-202ENST00000315585 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
CHFR-202ENST00000315585 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
CHFR-202ENST00000315585 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
CHFR-202ENST00000315585 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
CHFR-202ENST00000315585 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
CHFR-202ENST00000315585 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
CHFR-202ENST00000315585 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
CHFR-202ENST00000315585 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
CHFR-202ENST00000315585 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
CHFR-202ENST00000315585 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
CHFR-202ENST00000315585 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
CHFR-202ENST00000315585 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
CHFR-202ENST00000315585 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
CHFR-202ENST00000315585 KRTAP5-7Q6L8G8 165 aa3.1□□□□□ -1.91
CHFR-202ENST00000315585 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
CHFR-202ENST00000315585 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
CHFR-202ENST00000315585 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
CHFR-202ENST00000315585 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
CHFR-202ENST00000315585 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
CHFR-202ENST00000315585 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
CHFR-202ENST00000315585 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
CHFR-202ENST00000315585 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
CHFR-202ENST00000315585 KRTAP4-4Q9BYR3 166 aa2.48□□□□□ -2.01
CHFR-202ENST00000315585 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
CHFR-202ENST00000315585 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
CHFR-202ENST00000315585 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
CHFR-202ENST00000315585 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 84.6 ms