RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 CRCT1Q9UGL9 99 aa2.89□□□□□ -1.95
BDNF-201ENST00000314915 KRTAP4-7Q9BYR0 210 aa2.89□□□□□ -1.95
BDNF-201ENST00000314915 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
BDNF-201ENST00000314915 LCE5AQ5TCM9 118 aa2.85□□□□□ -1.95
BDNF-201ENST00000314915 KRTAP4-8A0A0G2JLE6 195 aa2.84□□□□□ -1.95
BDNF-201ENST00000314915 KRTAP4-8Q9BYQ9 185 aa2.84□□□□□ -1.95
BDNF-201ENST00000314915 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
BDNF-201ENST00000314915 KRTAP9-7A8MTY7 169 aa2.79□□□□□ -1.96
BDNF-201ENST00000314915 KRTAP9-3Q9BYQ3 159 aa2.78□□□□□ -1.96
BDNF-201ENST00000314915 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
BDNF-201ENST00000314915 MT1AP04731 61 aa2.76□□□□□ -1.97
BDNF-201ENST00000314915 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
BDNF-201ENST00000314915 MT1EP04732 61 aa2.74□□□□□ -1.97
BDNF-201ENST00000314915 USH2AO75445 5202 aa2.73□□□□□ -1.97
BDNF-201ENST00000314915 MT1LQ93083 61 aa2.73□□□□□ -1.97
BDNF-201ENST00000314915 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
BDNF-201ENST00000314915 KRTAP19-7Q3SYF9 63 aa2.72□□□□□ -1.97
BDNF-201ENST00000314915 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
BDNF-201ENST00000314915 MT1GP13640 62 aa2.69□□□□□ -1.98
BDNF-201ENST00000314915 KMT2DO14686 5537 aa2.66□□□□□ -1.98
BDNF-201ENST00000314915 LCE3BQ5TA77 95 aa2.64□□□□□ -1.99
BDNF-201ENST00000314915 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.62□□□□□ -1.99
BDNF-201ENST00000314915 SSPOA2VEC9 5147 aa2.61□□□□□ -1.99
BDNF-201ENST00000314915 FCGBPQ9Y6R7 5405 aaPredicted RBP2.6□□□□□ -1.99
BDNF-201ENST00000314915 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
BDNF-201ENST00000314915 MT3P25713 68 aa2.59□□□□□ -1.99
BDNF-201ENST00000314915 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
BDNF-201ENST00000314915 SYNE2Q8WXH0 6885 aaKnown RBP2.58□□□□□ -2
BDNF-201ENST00000314915 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
BDNF-201ENST00000314915 MACF1Q9UPN3 7388 aaKnown RBP2.57□□□□□ -2
BDNF-201ENST00000314915 KRTAP4-9Q9BYQ8 210 aa2.57□□□□□ -2
BDNF-201ENST00000314915 SPRR2FQ96RM1 72 aa2.54□□□□□ -2
BDNF-201ENST00000314915 MT1MQ8N339 61 aa2.49□□□□□ -2.01
BDNF-201ENST00000314915 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
BDNF-201ENST00000314915 SPRR2EP22531 72 aa2.45□□□□□ -2.02
BDNF-201ENST00000314915 SPRR2BP35325 72 aa2.45□□□□□ -2.02
BDNF-201ENST00000314915 SPRR2AP35326 72 aa2.45□□□□□ -2.02
BDNF-201ENST00000314915 KRTAP19-3Q7Z4W3 81 aa2.45□□□□□ -2.02
BDNF-201ENST00000314915 KRTAP9-4Q9BYQ2 154 aa2.42□□□□□ -2.02
BDNF-201ENST00000314915 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
BDNF-201ENST00000314915 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
BDNF-201ENST00000314915 SPRR2DP22532 72 aa2.36□□□□□ -2.03
BDNF-201ENST00000314915 DSTQ03001 7570 aaKnown RBP2.36□□□□□ -2.03
BDNF-201ENST00000314915 KRTAP20-1Q3LI63 56 aa2.35□□□□□ -2.03
BDNF-201ENST00000314915 KRTAP4-2Q9BYR5 136 aa2.35□□□□□ -2.03
BDNF-201ENST00000314915 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
BDNF-201ENST00000314915 KRTAP6-1Q3LI64 71 aa2.33□□□□□ -2.04
BDNF-201ENST00000314915 KRTAP9-9Q9BYP9 154 aa2.3□□□□□ -2.04
BDNF-201ENST00000314915 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
BDNF-201ENST00000314915 NEBP20929 6669 aa2.29□□□□□ -2.04
BDNF-201ENST00000314915 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
BDNF-201ENST00000314915 KRTAP5-9P26371 169 aa2.25□□□□□ -2.05
BDNF-201ENST00000314915 LCE4AQ5TA78 99 aa2.19□□□□□ -2.06
BDNF-201ENST00000314915 MT4P47944 62 aa2.13□□□□□ -2.07
BDNF-201ENST00000314915 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.07
BDNF-201ENST00000314915 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
BDNF-201ENST00000314915 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
BDNF-201ENST00000314915 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
BDNF-201ENST00000314915 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
BDNF-201ENST00000314915 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
BDNF-201ENST00000314915 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
BDNF-201ENST00000314915 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
BDNF-201ENST00000314915 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
BDNF-201ENST00000314915 KRTAP20-2Q3LI61 65 aa1.81□□□□□ -2.12
BDNF-201ENST00000314915 KRTAP5-4Q6L8H1 288 aa1.8□□□□□ -2.12
BDNF-201ENST00000314915 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
BDNF-201ENST00000314915 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
BDNF-201ENST00000314915 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
BDNF-201ENST00000314915 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
BDNF-201ENST00000314915 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
BDNF-201ENST00000314915 KRTAP4-4Q9BYR3 166 aa1.51□□□□□ -2.17
BDNF-201ENST00000314915 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
BDNF-201ENST00000314915 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
BDNF-201ENST00000314915 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
BDNF-201ENST00000314915 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
BDNF-201ENST00000314915 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
BDNF-201ENST00000314915 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 38.4 ms