RNA–Protein interactions for RNA: ENST00000314675.11

UBXN11-201, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 2,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-201ENST00000314675 SYNE2Q8WXH0 6885 aaKnown RBP6.94□□□□□ -1.3
UBXN11-201ENST00000314675 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
UBXN11-201ENST00000314675 SPRR2FQ96RM1 72 aa6.88□□□□□ -1.31
UBXN11-201ENST00000314675 KRTAP19-3Q7Z4W3 81 aa6.82□□□□□ -1.32
UBXN11-201ENST00000314675 KRTAP9-6A8MVA2 160 aa6.79□□□□□ -1.32
UBXN11-201ENST00000314675 MT1GP13640 62 aa6.77□□□□□ -1.33
UBXN11-201ENST00000314675 MT1MQ8N339 61 aa6.71□□□□□ -1.33
UBXN11-201ENST00000314675 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
UBXN11-201ENST00000314675 KRTAP4-3Q9BYR4 195 aa6.69□□□□□ -1.34
UBXN11-201ENST00000314675 KRTAP5-9P26371 169 aa6.67□□□□□ -1.34
UBXN11-201ENST00000314675 MDN1Q9NU22 5596 aa6.67□□□□□ -1.34
UBXN11-201ENST00000314675 KRTAP9-6A0A140TA67 174 aa6.6□□□□□ -1.35
UBXN11-201ENST00000314675 DSTQ03001 7570 aaKnown RBP6.59□□□□□ -1.36
UBXN11-201ENST00000314675 INE1O15225 51 aa6.56□□□□□ -1.36
UBXN11-201ENST00000314675 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
UBXN11-201ENST00000314675 LCE1AQ5T7P2 110 aa6.53□□□□□ -1.36
UBXN11-201ENST00000314675 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
UBXN11-201ENST00000314675 SPRR2EP22531 72 aa6.43□□□□□ -1.38
UBXN11-201ENST00000314675 SPRR2BP35325 72 aa6.43□□□□□ -1.38
UBXN11-201ENST00000314675 SPRR2AP35326 72 aa6.43□□□□□ -1.38
UBXN11-201ENST00000314675 KRTAP6-3Q3LI67 103 aa6.42□□□□□ -1.38
UBXN11-201ENST00000314675 KRTAP2-3P0C7H8 128 aa6.3□□□□□ -1.4
UBXN11-201ENST00000314675 KRTAP2-4Q9BYR9 128 aa6.3□□□□□ -1.4
UBXN11-201ENST00000314675 KRTAP2-1Q9BYU5 128 aa6.3□□□□□ -1.4
UBXN11-201ENST00000314675 SPRR2DP22532 72 aa6.18□□□□□ -1.42
UBXN11-201ENST00000314675 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
UBXN11-201ENST00000314675 KRTAP5-5Q701N2 237 aaPredicted RBP6.03□□□□□ -1.44
UBXN11-201ENST00000314675 NEBP20929 6669 aa6.03□□□□□ -1.44
UBXN11-201ENST00000314675 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.45
UBXN11-201ENST00000314675 MT1AP04731 61 aa5.95□□□□□ -1.46
UBXN11-201ENST00000314675 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
UBXN11-201ENST00000314675 SYNE1Q8NF91 8797 aaKnown RBP5.88□□□□□ -1.47
UBXN11-201ENST00000314675 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.5
UBXN11-201ENST00000314675 KRTAP5-4Q6L8H1 288 aa5.63□□□□□ -1.51
UBXN11-201ENST00000314675 KRTAP4-9Q9BYQ8 210 aa5.62□□□□□ -1.51
UBXN11-201ENST00000314675 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
UBXN11-201ENST00000314675 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
UBXN11-201ENST00000314675 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
UBXN11-201ENST00000314675 LCE4AQ5TA78 99 aa5.43□□□□□ -1.54
UBXN11-201ENST00000314675 KRTAP4-6Q9BYQ5 205 aa5.42□□□□□ -1.54
UBXN11-201ENST00000314675 MT4P47944 62 aa5.41□□□□□ -1.54
UBXN11-201ENST00000314675 KRTAP20-1Q3LI63 56 aa5.39□□□□□ -1.55
UBXN11-201ENST00000314675 MT3P25713 68 aa5.38□□□□□ -1.55
UBXN11-201ENST00000314675 LCE3DQ9BYE3 92 aa5.37□□□□□ -1.55
UBXN11-201ENST00000314675 OBSCNQ5VST9 7968 aa5.3□□□□□ -1.56
UBXN11-201ENST00000314675 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
UBXN11-201ENST00000314675 KRTAP20-2Q3LI61 65 aa5.27□□□□□ -1.57
UBXN11-201ENST00000314675 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
UBXN11-201ENST00000314675 LCE3EQ5T5B0 92 aa5.23□□□□□ -1.57
UBXN11-201ENST00000314675 KRTAP5-2Q701N4 177 aa5.13□□□□□ -1.59
UBXN11-201ENST00000314675 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
UBXN11-201ENST00000314675 PRM1P04553 51 aa4.81□□□□□ -1.64
UBXN11-201ENST00000314675 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
UBXN11-201ENST00000314675 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
UBXN11-201ENST00000314675 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
UBXN11-201ENST00000314675 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
UBXN11-201ENST00000314675 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
UBXN11-201ENST00000314675 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.71
UBXN11-201ENST00000314675 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
UBXN11-201ENST00000314675 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
UBXN11-201ENST00000314675 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
UBXN11-201ENST00000314675 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
UBXN11-201ENST00000314675 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
UBXN11-201ENST00000314675 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
UBXN11-201ENST00000314675 GPR98Q8WXG9 6306 aa3.95□□□□□ -1.78
UBXN11-201ENST00000314675 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
UBXN11-201ENST00000314675 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
UBXN11-201ENST00000314675 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
UBXN11-201ENST00000314675 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
UBXN11-201ENST00000314675 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
UBXN11-201ENST00000314675 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
UBXN11-201ENST00000314675 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
UBXN11-201ENST00000314675 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
UBXN11-201ENST00000314675 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
UBXN11-201ENST00000314675 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
UBXN11-201ENST00000314675 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
UBXN11-201ENST00000314675 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 117.2 ms