RNA–Protein interactions for RNA: ENST00000314583.7

HCLS1-201, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCLS1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-201ENST00000314583 KRTAP19-3Q7Z4W3 81 aa6.26□□□□□ -1.41
HCLS1-201ENST00000314583 SPRR2FQ96RM1 72 aa6.26□□□□□ -1.41
HCLS1-201ENST00000314583 MACF1Q9UPN3 7388 aaKnown RBP6.26□□□□□ -1.41
HCLS1-201ENST00000314583 MT1GP13640 62 aa6.25□□□□□ -1.41
HCLS1-201ENST00000314583 MT1MQ8N339 61 aa6.19□□□□□ -1.42
HCLS1-201ENST00000314583 MUC12Q9UKN1 5478 aa6.18□□□□□ -1.42
HCLS1-201ENST00000314583 KRTAP5-9P26371 169 aa6.18□□□□□ -1.42
HCLS1-201ENST00000314583 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.43
HCLS1-201ENST00000314583 KRTAP9-6A0A140TA67 174 aa6.09□□□□□ -1.43
HCLS1-201ENST00000314583 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
HCLS1-201ENST00000314583 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.03□□□□□ -1.44
HCLS1-201ENST00000314583 SYNE2Q8WXH0 6885 aaKnown RBP6.02□□□□□ -1.45
HCLS1-201ENST00000314583 KRTAP2-3P0C7H8 128 aa6.02□□□□□ -1.45
HCLS1-201ENST00000314583 KRTAP2-4Q9BYR9 128 aa6.02□□□□□ -1.45
HCLS1-201ENST00000314583 KRTAP2-1Q9BYU5 128 aa6.02□□□□□ -1.45
HCLS1-201ENST00000314583 LCE1AQ5T7P2 110 aa6.01□□□□□ -1.45
HCLS1-201ENST00000314583 KRTAP6-3Q3LI67 103 aa5.96□□□□□ -1.45
HCLS1-201ENST00000314583 INE1O15225 51 aa5.95□□□□□ -1.46
HCLS1-201ENST00000314583 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
HCLS1-201ENST00000314583 SPRR2EP22531 72 aa5.9□□□□□ -1.47
HCLS1-201ENST00000314583 SPRR2BP35325 72 aa5.9□□□□□ -1.47
HCLS1-201ENST00000314583 SPRR2AP35326 72 aa5.9□□□□□ -1.47
HCLS1-201ENST00000314583 MDN1Q9NU22 5596 aa5.85□□□□□ -1.47
HCLS1-201ENST00000314583 SPRR2DP22532 72 aa5.67□□□□□ -1.5
HCLS1-201ENST00000314583 KRTAP9-7A8MTY7 169 aa5.6□□□□□ -1.51
HCLS1-201ENST00000314583 DSTQ03001 7570 aaKnown RBP5.6□□□□□ -1.51
HCLS1-201ENST00000314583 KRTAP5-5Q701N2 237 aaPredicted RBP5.57□□□□□ -1.52
HCLS1-201ENST00000314583 MT1AP04731 61 aa5.55□□□□□ -1.52
HCLS1-201ENST00000314583 NEBP20929 6669 aa5.49□□□□□ -1.53
HCLS1-201ENST00000314583 KRTAP6-1Q3LI64 71 aa5.48□□□□□ -1.53
HCLS1-201ENST00000314583 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
HCLS1-201ENST00000314583 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
HCLS1-201ENST00000314583 KRTAP5-4Q6L8H1 288 aa5.23□□□□□ -1.57
HCLS1-201ENST00000314583 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
HCLS1-201ENST00000314583 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
HCLS1-201ENST00000314583 KRTAP4-9Q9BYQ8 210 aa5.15□□□□□ -1.58
HCLS1-201ENST00000314583 LCE3DQ9BYE3 92 aa5.07□□□□□ -1.6
HCLS1-201ENST00000314583 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
HCLS1-201ENST00000314583 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
HCLS1-201ENST00000314583 MT3P25713 68 aa5.01□□□□□ -1.61
HCLS1-201ENST00000314583 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
HCLS1-201ENST00000314583 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
HCLS1-201ENST00000314583 LCE3EQ5T5B0 92 aa4.98□□□□□ -1.61
HCLS1-201ENST00000314583 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
HCLS1-201ENST00000314583 MT4P47944 62 aa4.92□□□□□ -1.62
HCLS1-201ENST00000314583 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
HCLS1-201ENST00000314583 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
HCLS1-201ENST00000314583 KRTAP5-2Q701N4 177 aa4.79□□□□□ -1.64
HCLS1-201ENST00000314583 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
HCLS1-201ENST00000314583 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
HCLS1-201ENST00000314583 PRM1P04553 51 aa4.51□□□□□ -1.69
HCLS1-201ENST00000314583 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
HCLS1-201ENST00000314583 LCE1EQ5T753 118 aa4.26□□□□□ -1.73
HCLS1-201ENST00000314583 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
HCLS1-201ENST00000314583 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
HCLS1-201ENST00000314583 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
HCLS1-201ENST00000314583 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
HCLS1-201ENST00000314583 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
HCLS1-201ENST00000314583 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
HCLS1-201ENST00000314583 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
HCLS1-201ENST00000314583 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
HCLS1-201ENST00000314583 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
HCLS1-201ENST00000314583 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
HCLS1-201ENST00000314583 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
HCLS1-201ENST00000314583 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
HCLS1-201ENST00000314583 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
HCLS1-201ENST00000314583 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
HCLS1-201ENST00000314583 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
HCLS1-201ENST00000314583 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
HCLS1-201ENST00000314583 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
HCLS1-201ENST00000314583 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
HCLS1-201ENST00000314583 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
HCLS1-201ENST00000314583 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
HCLS1-201ENST00000314583 PHGR1C9JFL3 82 aa3□□□□□ -1.93
HCLS1-201ENST00000314583 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
HCLS1-201ENST00000314583 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
HCLS1-201ENST00000314583 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 71.9 ms