RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 ANAPC13Q9BS18 74 aa4.67□□□□□ -1.66
CKS2-201ENST00000314355 PRR15LQ9BU68 103 aa4.67□□□□□ -1.66
CKS2-201ENST00000314355 CYSTM1Q9H1C7 97 aa4.65□□□□□ -1.67
CKS2-201ENST00000314355 MT1GP13640 62 aa4.64□□□□□ -1.67
CKS2-201ENST00000314355 KRTAP19-5Q3LI72 72 aa4.63□□□□□ -1.67
CKS2-201ENST00000314355 TNP1P09430 55 aa4.62□□□□□ -1.67
CKS2-201ENST00000314355 A8MU10 97 aa4.6□□□□□ -1.67
CKS2-201ENST00000314355 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
CKS2-201ENST00000314355 ATP5EP56381 51 aaPredicted RBP4.57□□□□□ -1.68
CKS2-201ENST00000314355 CCDC179H3BU77 68 aa4.5□□□□□ -1.69
CKS2-201ENST00000314355 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
CKS2-201ENST00000314355 LCE3AQ5TA76 89 aa4.49□□□□□ -1.69
CKS2-201ENST00000314355 MT1MQ8N339 61 aa4.49□□□□□ -1.69
CKS2-201ENST00000314355 MT1LQ93083 61 aa4.49□□□□□ -1.69
CKS2-201ENST00000314355 LINC01558Q9Y6Z2 57 aa4.48□□□□□ -1.69
CKS2-201ENST00000314355 UQCR11O14957 56 aa4.46□□□□□ -1.7
CKS2-201ENST00000314355 MT4P47944 62 aa4.41□□□□□ -1.7
CKS2-201ENST00000314355 K7ERS5 55 aa4.39□□□□□ -1.71
CKS2-201ENST00000314355 TMEM258P61165 79 aa4.39□□□□□ -1.71
CKS2-201ENST00000314355 KRTAP12-3P60328 96 aa4.36□□□□□ -1.71
CKS2-201ENST00000314355 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
CKS2-201ENST00000314355 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
CKS2-201ENST00000314355 KRTAP25-1Q3LHN0 102 aa4.3□□□□□ -1.72
CKS2-201ENST00000314355 KRTAP5-4Q6L8H1 288 aa4.28□□□□□ -1.72
CKS2-201ENST00000314355 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
CKS2-201ENST00000314355 V9GYY9 64 aa4.27□□□□□ -1.73
CKS2-201ENST00000314355 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
CKS2-201ENST00000314355 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
CKS2-201ENST00000314355 PSPHP1O15172 72 aa4.17□□□□□ -1.74
CKS2-201ENST00000314355 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
CKS2-201ENST00000314355 Q1T7F1 81 aa4.13□□□□□ -1.75
CKS2-201ENST00000314355 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
CKS2-201ENST00000314355 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
CKS2-201ENST00000314355 A6NED7 52 aa4.08□□□□□ -1.76
CKS2-201ENST00000314355 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
CKS2-201ENST00000314355 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
CKS2-201ENST00000314355 CDC42SE1Q9NRR8 79 aa4.06□□□□□ -1.76
CKS2-201ENST00000314355 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
CKS2-201ENST00000314355 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
CKS2-201ENST00000314355 RPS28P62857 69 aaKnown RBP4□□□□□ -1.77
CKS2-201ENST00000314355 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
CKS2-201ENST00000314355 ROMO1P60602 79 aa3.95□□□□□ -1.78
CKS2-201ENST00000314355 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.78
CKS2-201ENST00000314355 MT1AP04731 61 aa3.84□□□□□ -1.79
CKS2-201ENST00000314355 NDUFAF8A1L188 74 aa3.79□□□□□ -1.8
CKS2-201ENST00000314355 KRTAP6-1Q3LI64 71 aa3.78□□□□□ -1.8
CKS2-201ENST00000314355 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
CKS2-201ENST00000314355 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
CKS2-201ENST00000314355 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
CKS2-201ENST00000314355 MT3P25713 68 aa3.64□□□□□ -1.83
CKS2-201ENST00000314355 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
CKS2-201ENST00000314355 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
CKS2-201ENST00000314355 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
CKS2-201ENST00000314355 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
CKS2-201ENST00000314355 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
CKS2-201ENST00000314355 BRK1Q8WUW1 75 aa3.4□□□□□ -1.87
CKS2-201ENST00000314355 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
CKS2-201ENST00000314355 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
CKS2-201ENST00000314355 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
CKS2-201ENST00000314355 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
CKS2-201ENST00000314355 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
CKS2-201ENST00000314355 PMAIP1Q13794 54 aa3.22□□□□□ -1.89
CKS2-201ENST00000314355 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
CKS2-201ENST00000314355 PRO0628Q9UI54 55 aa3.11□□□□□ -1.91
CKS2-201ENST00000314355 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
CKS2-201ENST00000314355 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
CKS2-201ENST00000314355 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
CKS2-201ENST00000314355 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
CKS2-201ENST00000314355 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
CKS2-201ENST00000314355 KTN1-AS1Q86SY8 53 aa2.74□□□□□ -1.97
CKS2-201ENST00000314355 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
CKS2-201ENST00000314355 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
CKS2-201ENST00000314355 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
CKS2-201ENST00000314355 PRM1P04553 51 aa1.98□□□□□ -2.09
CKS2-201ENST00000314355 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
CKS2-201ENST00000314355 INE1O15225 51 aa1.78□□□□□ -2.12
CKS2-201ENST00000314355 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms