RNA–Protein interactions for RNA: ENST00000312960.3

SIAH2-201, Transcript of siah E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIAH2, Length 2,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIAH2-201ENST00000312960 KRTAP2-3P0C7H8 128 aa7.7□□□□□ -1.18
SIAH2-201ENST00000312960 KRTAP2-4Q9BYR9 128 aa7.7□□□□□ -1.18
SIAH2-201ENST00000312960 KRTAP2-1Q9BYU5 128 aa7.7□□□□□ -1.18
SIAH2-201ENST00000312960 CRCT1Q9UGL9 99 aa7.67□□□□□ -1.18
SIAH2-201ENST00000312960 MACF1Q9UPN3 7388 aaKnown RBP7.55□□□□□ -1.2
SIAH2-201ENST00000312960 MUC12Q9UKN1 5478 aa7.47□□□□□ -1.21
SIAH2-201ENST00000312960 KRTAP4-3Q9BYR4 195 aa7.45□□□□□ -1.22
SIAH2-201ENST00000312960 KRTAP19-3Q7Z4W3 81 aa7.45□□□□□ -1.22
SIAH2-201ENST00000312960 MT1GP13640 62 aa7.43□□□□□ -1.22
SIAH2-201ENST00000312960 MT1MQ8N339 61 aa7.42□□□□□ -1.22
SIAH2-201ENST00000312960 LOC100996750A0A140TA64 210 aa7.39□□□□□ -1.23
SIAH2-201ENST00000312960 SPRR2FQ96RM1 72 aa7.37□□□□□ -1.23
SIAH2-201ENST00000312960 SYNE2Q8WXH0 6885 aaKnown RBP7.35□□□□□ -1.23
SIAH2-201ENST00000312960 LCE5AQ5TCM9 118 aa7.23□□□□□ -1.25
SIAH2-201ENST00000312960 KRTAP5-9P26371 169 aa7.19□□□□□ -1.26
SIAH2-201ENST00000312960 KRTAP9-6A0A140TA67 174 aa7.18□□□□□ -1.26
SIAH2-201ENST00000312960 MDN1Q9NU22 5596 aa7.1□□□□□ -1.27
SIAH2-201ENST00000312960 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.27
SIAH2-201ENST00000312960 LCE1AQ5T7P2 110 aa7.03□□□□□ -1.28
SIAH2-201ENST00000312960 DSTQ03001 7570 aaKnown RBP6.99□□□□□ -1.29
SIAH2-201ENST00000312960 KRTAP6-3Q3LI67 103 aa6.95□□□□□ -1.3
SIAH2-201ENST00000312960 SPRR2EP22531 72 aa6.92□□□□□ -1.3
SIAH2-201ENST00000312960 SPRR2BP35325 72 aa6.92□□□□□ -1.3
SIAH2-201ENST00000312960 SPRR2AP35326 72 aa6.92□□□□□ -1.3
SIAH2-201ENST00000312960 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
SIAH2-201ENST00000312960 KRTAP12-4P60329 112 aa6.73□□□□□ -1.33
SIAH2-201ENST00000312960 KRTAP6-1Q3LI64 71 aa6.71□□□□□ -1.34
SIAH2-201ENST00000312960 MT1AP04731 61 aa6.67□□□□□ -1.34
SIAH2-201ENST00000312960 SPRR2DP22532 72 aa6.65□□□□□ -1.35
SIAH2-201ENST00000312960 KRTAP9-7A8MTY7 169 aa6.62□□□□□ -1.35
SIAH2-201ENST00000312960 KRTAP5-5Q701N2 237 aaPredicted RBP6.6□□□□□ -1.35
SIAH2-201ENST00000312960 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
SIAH2-201ENST00000312960 NEBP20929 6669 aa6.51□□□□□ -1.37
SIAH2-201ENST00000312960 SYNE1Q8NF91 8797 aaKnown RBP6.46□□□□□ -1.38
SIAH2-201ENST00000312960 LCE3DQ9BYE3 92 aa6.37□□□□□ -1.39
SIAH2-201ENST00000312960 KRTAP9-4Q9BYQ2 154 aa6.29□□□□□ -1.4
SIAH2-201ENST00000312960 LCE3EQ5T5B0 92 aa6.28□□□□□ -1.4
SIAH2-201ENST00000312960 KRTAP5-4Q6L8H1 288 aa6.06□□□□□ -1.44
SIAH2-201ENST00000312960 KRTAP6-2Q3LI66 62 aa6.02□□□□□ -1.45
SIAH2-201ENST00000312960 MT3P25713 68 aa5.99□□□□□ -1.45
SIAH2-201ENST00000312960 PRM1P04553 51 aa5.92□□□□□ -1.46
SIAH2-201ENST00000312960 KRTAP2-2Q9BYT5 123 aa5.92□□□□□ -1.46
SIAH2-201ENST00000312960 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
SIAH2-201ENST00000312960 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
SIAH2-201ENST00000312960 LCE4AQ5TA78 99 aa5.84□□□□□ -1.47
SIAH2-201ENST00000312960 MT4P47944 62 aa5.83□□□□□ -1.48
SIAH2-201ENST00000312960 KRTAP20-2Q3LI61 65 aa5.68□□□□□ -1.5
SIAH2-201ENST00000312960 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
SIAH2-201ENST00000312960 HMCN1Q96RW7 5635 aa5.66□□□□□ -1.5
SIAH2-201ENST00000312960 OBSCNQ5VST9 7968 aa5.65□□□□□ -1.5
SIAH2-201ENST00000312960 KRTAP5-2Q701N4 177 aa5.53□□□□□ -1.52
SIAH2-201ENST00000312960 KRTAP5-3Q6L8H2 238 aa5.47□□□□□ -1.53
SIAH2-201ENST00000312960 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
SIAH2-201ENST00000312960 LCE1EQ5T753 118 aa4.96□□□□□ -1.61
SIAH2-201ENST00000312960 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
SIAH2-201ENST00000312960 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
SIAH2-201ENST00000312960 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
SIAH2-201ENST00000312960 KRTAP5-1Q6L8H4 278 aa4.8□□□□□ -1.64
SIAH2-201ENST00000312960 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
SIAH2-201ENST00000312960 KRTAP5-10Q6L8G5 202 aa4.71□□□□□ -1.66
SIAH2-201ENST00000312960 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
SIAH2-201ENST00000312960 KRTAP4-2Q9BYR5 136 aa4.68□□□□□ -1.66
SIAH2-201ENST00000312960 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
SIAH2-201ENST00000312960 KRTAP5-7Q6L8G8 165 aa4.53□□□□□ -1.68
SIAH2-201ENST00000312960 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
SIAH2-201ENST00000312960 KRTAP21-2Q3LI59 83 aa4.36□□□□□ -1.71
SIAH2-201ENST00000312960 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
SIAH2-201ENST00000312960 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
SIAH2-201ENST00000312960 KRTAP5-11Q6L8G4 156 aa4.03□□□□□ -1.76
SIAH2-201ENST00000312960 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
SIAH2-201ENST00000312960 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
SIAH2-201ENST00000312960 KRTAP21-1Q3LI58 79 aa3.75□□□□□ -1.81
SIAH2-201ENST00000312960 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
SIAH2-201ENST00000312960 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
SIAH2-201ENST00000312960 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
SIAH2-201ENST00000312960 PHGR1C9JFL3 82 aa3.48□□□□□ -1.85
SIAH2-201ENST00000312960 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 107.5 ms