RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
CLCF1-201ENST00000312438 MT1GP13640 62 aa5.76□□□□□ -1.49
CLCF1-201ENST00000312438 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
CLCF1-201ENST00000312438 KRTAP5-9P26371 169 aa5.74□□□□□ -1.49
CLCF1-201ENST00000312438 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
CLCF1-201ENST00000312438 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
CLCF1-201ENST00000312438 MT1MQ8N339 61 aa5.67□□□□□ -1.5
CLCF1-201ENST00000312438 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
CLCF1-201ENST00000312438 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
CLCF1-201ENST00000312438 KRTAP9-6A8MVA2 160 aa5.6□□□□□ -1.51
CLCF1-201ENST00000312438 KRTAP6-3Q3LI67 103 aa5.6□□□□□ -1.51
CLCF1-201ENST00000312438 LCE1AQ5T7P2 110 aa5.58□□□□□ -1.52
CLCF1-201ENST00000312438 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
CLCF1-201ENST00000312438 SPRR2EP22531 72 aa5.51□□□□□ -1.53
CLCF1-201ENST00000312438 SPRR2BP35325 72 aa5.51□□□□□ -1.53
CLCF1-201ENST00000312438 SPRR2AP35326 72 aa5.51□□□□□ -1.53
CLCF1-201ENST00000312438 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
CLCF1-201ENST00000312438 MDN1Q9NU22 5596 aa5.38□□□□□ -1.55
CLCF1-201ENST00000312438 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
CLCF1-201ENST00000312438 SPRR2DP22532 72 aa5.31□□□□□ -1.56
CLCF1-201ENST00000312438 DSTQ03001 7570 aaKnown RBP5.28□□□□□ -1.56
CLCF1-201ENST00000312438 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
CLCF1-201ENST00000312438 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
CLCF1-201ENST00000312438 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
CLCF1-201ENST00000312438 A0A0A0MQY5 61 aa5.19□□□□□ -1.58
CLCF1-201ENST00000312438 KRTAP5-5Q701N2 237 aaPredicted RBP5.1□□□□□ -1.59
CLCF1-201ENST00000312438 NEBP20929 6669 aa5.09□□□□□ -1.59
CLCF1-201ENST00000312438 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
CLCF1-201ENST00000312438 MT1AP04731 61 aa5.04□□□□□ -1.6
CLCF1-201ENST00000312438 KRTAP6-1Q3LI64 71 aa5□□□□□ -1.61
CLCF1-201ENST00000312438 INE1O15225 51 aa4.85□□□□□ -1.63
CLCF1-201ENST00000312438 KRTAP5-4Q6L8H1 288 aa4.83□□□□□ -1.64
CLCF1-201ENST00000312438 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
CLCF1-201ENST00000312438 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
CLCF1-201ENST00000312438 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
CLCF1-201ENST00000312438 KRTAP12-4P60329 112 aa4.74□□□□□ -1.65
CLCF1-201ENST00000312438 KRTAP20-1Q3LI63 56 aa4.73□□□□□ -1.65
CLCF1-201ENST00000312438 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
CLCF1-201ENST00000312438 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
CLCF1-201ENST00000312438 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
CLCF1-201ENST00000312438 MT4P47944 62 aa4.6□□□□□ -1.67
CLCF1-201ENST00000312438 MT3P25713 68 aa4.59□□□□□ -1.67
CLCF1-201ENST00000312438 KRTAP6-2Q3LI66 62 aa4.58□□□□□ -1.68
CLCF1-201ENST00000312438 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
CLCF1-201ENST00000312438 GPR98Q8WXG9 6306 aa4.51□□□□□ -1.69
CLCF1-201ENST00000312438 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
CLCF1-201ENST00000312438 LCE1DQ5T752 114 aa4.5□□□□□ -1.69
CLCF1-201ENST00000312438 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
CLCF1-201ENST00000312438 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
CLCF1-201ENST00000312438 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
CLCF1-201ENST00000312438 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
CLCF1-201ENST00000312438 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
CLCF1-201ENST00000312438 KRTAP9-9Q9BYP9 154 aa4.28□□□□□ -1.72
CLCF1-201ENST00000312438 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
CLCF1-201ENST00000312438 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
CLCF1-201ENST00000312438 KRTAP4-11Q9BYQ6 195 aa3.89□□□□□ -1.79
CLCF1-201ENST00000312438 PRM1P04553 51 aa3.85□□□□□ -1.79
CLCF1-201ENST00000312438 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
CLCF1-201ENST00000312438 AHNAK2Q8IVF2 5795 aa3.73□□□□□ -1.81
CLCF1-201ENST00000312438 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
CLCF1-201ENST00000312438 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
CLCF1-201ENST00000312438 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
CLCF1-201ENST00000312438 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
CLCF1-201ENST00000312438 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
CLCF1-201ENST00000312438 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
CLCF1-201ENST00000312438 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
CLCF1-201ENST00000312438 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
CLCF1-201ENST00000312438 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
CLCF1-201ENST00000312438 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
CLCF1-201ENST00000312438 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
CLCF1-201ENST00000312438 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
CLCF1-201ENST00000312438 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
CLCF1-201ENST00000312438 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
CLCF1-201ENST00000312438 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
CLCF1-201ENST00000312438 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
CLCF1-201ENST00000312438 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
CLCF1-201ENST00000312438 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 170.3 ms