RNA–Protein interactions for RNA: ENST00000311652.9

AGAP4-201, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP4, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP4-201ENST00000311652 KRTAP9-6A8MVA2 160 aa6.56□□□□□ -1.36
AGAP4-201ENST00000311652 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.38
AGAP4-201ENST00000311652 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
AGAP4-201ENST00000311652 KRTAP9-6A0A140TA67 174 aa6.33□□□□□ -1.4
AGAP4-201ENST00000311652 KRTAP19-3Q7Z4W3 81 aa6.29□□□□□ -1.4
AGAP4-201ENST00000311652 MT1GP13640 62 aa6.26□□□□□ -1.41
AGAP4-201ENST00000311652 KRTAP2-3P0C7H8 128 aa6.25□□□□□ -1.41
AGAP4-201ENST00000311652 KRTAP2-4Q9BYR9 128 aa6.25□□□□□ -1.41
AGAP4-201ENST00000311652 KRTAP2-1Q9BYU5 128 aa6.25□□□□□ -1.41
AGAP4-201ENST00000311652 MUC12Q9UKN1 5478 aa6.25□□□□□ -1.41
AGAP4-201ENST00000311652 MT1MQ8N339 61 aa6.24□□□□□ -1.41
AGAP4-201ENST00000311652 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
AGAP4-201ENST00000311652 SPRR2FQ96RM1 72 aa6.16□□□□□ -1.42
AGAP4-201ENST00000311652 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
AGAP4-201ENST00000311652 LCE5AQ5TCM9 118 aa6.12□□□□□ -1.43
AGAP4-201ENST00000311652 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
AGAP4-201ENST00000311652 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
AGAP4-201ENST00000311652 KRTAP5-9P26371 169 aa5.92□□□□□ -1.46
AGAP4-201ENST00000311652 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
AGAP4-201ENST00000311652 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
AGAP4-201ENST00000311652 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
AGAP4-201ENST00000311652 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
AGAP4-201ENST00000311652 SPRR2EP22531 72 aa5.76□□□□□ -1.49
AGAP4-201ENST00000311652 SPRR2BP35325 72 aa5.76□□□□□ -1.49
AGAP4-201ENST00000311652 SPRR2AP35326 72 aa5.76□□□□□ -1.49
AGAP4-201ENST00000311652 NEBP20929 6669 aa5.6□□□□□ -1.51
AGAP4-201ENST00000311652 KRTAP6-1Q3LI64 71 aa5.6□□□□□ -1.51
AGAP4-201ENST00000311652 MT1AP04731 61 aa5.59□□□□□ -1.52
AGAP4-201ENST00000311652 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
AGAP4-201ENST00000311652 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
AGAP4-201ENST00000311652 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
AGAP4-201ENST00000311652 SPRR2DP22532 72 aa5.54□□□□□ -1.52
AGAP4-201ENST00000311652 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
AGAP4-201ENST00000311652 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.55
AGAP4-201ENST00000311652 SYNE1Q8NF91 8797 aaKnown RBP5.32□□□□□ -1.56
AGAP4-201ENST00000311652 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
AGAP4-201ENST00000311652 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
AGAP4-201ENST00000311652 LCE1EQ5T753 118 aa5.17□□□□□ -1.58
AGAP4-201ENST00000311652 LCE3EQ5T5B0 92 aa5.14□□□□□ -1.59
AGAP4-201ENST00000311652 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
AGAP4-201ENST00000311652 KRTAP6-2Q3LI66 62 aa5.06□□□□□ -1.6
AGAP4-201ENST00000311652 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
AGAP4-201ENST00000311652 MT3P25713 68 aa5.03□□□□□ -1.6
AGAP4-201ENST00000311652 KRTAP4-6Q9BYQ5 205 aa4.95□□□□□ -1.62
AGAP4-201ENST00000311652 LCE1DQ5T752 114 aa4.95□□□□□ -1.62
AGAP4-201ENST00000311652 MT4P47944 62 aa4.89□□□□□ -1.63
AGAP4-201ENST00000311652 LCE1FQ5T754 118 aa4.84□□□□□ -1.63
AGAP4-201ENST00000311652 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
AGAP4-201ENST00000311652 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
AGAP4-201ENST00000311652 PRM1P04553 51 aa4.76□□□□□ -1.65
AGAP4-201ENST00000311652 KRTAP20-2Q3LI61 65 aa4.71□□□□□ -1.66
AGAP4-201ENST00000311652 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
AGAP4-201ENST00000311652 KRTAP5-2Q701N4 177 aa4.66□□□□□ -1.66
AGAP4-201ENST00000311652 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
AGAP4-201ENST00000311652 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
AGAP4-201ENST00000311652 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.7
AGAP4-201ENST00000311652 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
AGAP4-201ENST00000311652 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
AGAP4-201ENST00000311652 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
AGAP4-201ENST00000311652 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
AGAP4-201ENST00000311652 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
AGAP4-201ENST00000311652 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
AGAP4-201ENST00000311652 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
AGAP4-201ENST00000311652 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
AGAP4-201ENST00000311652 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
AGAP4-201ENST00000311652 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
AGAP4-201ENST00000311652 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
AGAP4-201ENST00000311652 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
AGAP4-201ENST00000311652 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
AGAP4-201ENST00000311652 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
AGAP4-201ENST00000311652 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
AGAP4-201ENST00000311652 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
AGAP4-201ENST00000311652 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
AGAP4-201ENST00000311652 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
AGAP4-201ENST00000311652 KRTAP21-1Q3LI58 79 aa3.06□□□□□ -1.92
AGAP4-201ENST00000311652 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
AGAP4-201ENST00000311652 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 376.7 ms