RNA–Protein interactions for RNA: ENST00000310574.7

SLC5A6-201, Transcript of solute carrier family 5 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC5A6, Length 3,231 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-201ENST00000310574 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.81
SLC5A6-201ENST00000310574 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
SLC5A6-201ENST00000310574 SSPOA2VEC9 5147 aa3.67□□□□□ -1.82
SLC5A6-201ENST00000310574 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
SLC5A6-201ENST00000310574 MT1GP13640 62 aa3.66□□□□□ -1.82
SLC5A6-201ENST00000310574 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
SLC5A6-201ENST00000310574 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
SLC5A6-201ENST00000310574 PRM1P04553 51 aa3.63□□□□□ -1.83
SLC5A6-201ENST00000310574 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
SLC5A6-201ENST00000310574 FCGBPQ9Y6R7 5405 aaPredicted RBP3.63□□□□□ -1.83
SLC5A6-201ENST00000310574 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
SLC5A6-201ENST00000310574 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
SLC5A6-201ENST00000310574 LCE3BQ5TA77 95 aa3.59□□□□□ -1.83
SLC5A6-201ENST00000310574 MT1MQ8N339 61 aa3.59□□□□□ -1.84
SLC5A6-201ENST00000310574 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
SLC5A6-201ENST00000310574 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
SLC5A6-201ENST00000310574 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
SLC5A6-201ENST00000310574 KRTAP9-2Q9BYQ4 174 aa3.57□□□□□ -1.84
SLC5A6-201ENST00000310574 LCE2DQ5TA82 110 aaPredicted RBP3.56□□□□□ -1.84
SLC5A6-201ENST00000310574 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
SLC5A6-201ENST00000310574 KRTAP9-6A0A140TA67 174 aa3.52□□□□□ -1.85
SLC5A6-201ENST00000310574 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
SLC5A6-201ENST00000310574 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
SLC5A6-201ENST00000310574 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
SLC5A6-201ENST00000310574 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
SLC5A6-201ENST00000310574 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
SLC5A6-201ENST00000310574 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
SLC5A6-201ENST00000310574 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
SLC5A6-201ENST00000310574 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
SLC5A6-201ENST00000310574 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
SLC5A6-201ENST00000310574 MT1AP04731 61 aa3.31□□□□□ -1.88
SLC5A6-201ENST00000310574 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
SLC5A6-201ENST00000310574 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
SLC5A6-201ENST00000310574 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
SLC5A6-201ENST00000310574 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
SLC5A6-201ENST00000310574 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.11□□□□□ -1.91
SLC5A6-201ENST00000310574 SPRR2EP22531 72 aa3.08□□□□□ -1.92
SLC5A6-201ENST00000310574 SPRR2BP35325 72 aa3.08□□□□□ -1.92
SLC5A6-201ENST00000310574 SPRR2AP35326 72 aa3.08□□□□□ -1.92
SLC5A6-201ENST00000310574 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
SLC5A6-201ENST00000310574 KRTAP5-9P26371 169 aa3.02□□□□□ -1.93
SLC5A6-201ENST00000310574 MT3P25713 68 aa2.95□□□□□ -1.94
SLC5A6-201ENST00000310574 SPRR2DP22532 72 aa2.94□□□□□ -1.94
SLC5A6-201ENST00000310574 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
SLC5A6-201ENST00000310574 NEBP20929 6669 aa2.88□□□□□ -1.95
SLC5A6-201ENST00000310574 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
SLC5A6-201ENST00000310574 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
SLC5A6-201ENST00000310574 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
SLC5A6-201ENST00000310574 MT4P47944 62 aa2.61□□□□□ -1.99
SLC5A6-201ENST00000310574 KRTAP4-6Q9BYQ5 205 aa2.6□□□□□ -1.99
SLC5A6-201ENST00000310574 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
SLC5A6-201ENST00000310574 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2.01
SLC5A6-201ENST00000310574 HMCN1Q96RW7 5635 aa2.52□□□□□ -2.01
SLC5A6-201ENST00000310574 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
SLC5A6-201ENST00000310574 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
SLC5A6-201ENST00000310574 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
SLC5A6-201ENST00000310574 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.02
SLC5A6-201ENST00000310574 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
SLC5A6-201ENST00000310574 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
SLC5A6-201ENST00000310574 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
SLC5A6-201ENST00000310574 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
SLC5A6-201ENST00000310574 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
SLC5A6-201ENST00000310574 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
SLC5A6-201ENST00000310574 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
SLC5A6-201ENST00000310574 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
SLC5A6-201ENST00000310574 KRTAP4-4Q9BYR3 166 aa2.09□□□□□ -2.07
SLC5A6-201ENST00000310574 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
SLC5A6-201ENST00000310574 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
SLC5A6-201ENST00000310574 KRTAP9-9Q9BYP9 154 aa2.03□□□□□ -2.08
SLC5A6-201ENST00000310574 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
SLC5A6-201ENST00000310574 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
SLC5A6-201ENST00000310574 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
SLC5A6-201ENST00000310574 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
SLC5A6-201ENST00000310574 KRTAP4-12Q9BQ66 201 aa1.8□□□□□ -2.12
SLC5A6-201ENST00000310574 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
SLC5A6-201ENST00000310574 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
SLC5A6-201ENST00000310574 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 22.5 ms