RNA–Protein interactions for RNA: ENST00000310032.12

TSPAN17-202, Transcript of tetraspanin 17, humanhuman

TSL 5 BASIC

Gene TSPAN17, Length 2,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-202ENST00000310032 MT1EP04732 61 aa6.79□□□□□ -1.32
TSPAN17-202ENST00000310032 MT1LQ93083 61 aa6.75□□□□□ -1.33
TSPAN17-202ENST00000310032 KRTAP9-2Q9BYQ4 174 aa6.69□□□□□ -1.34
TSPAN17-202ENST00000310032 MACF1Q9UPN3 7388 aaKnown RBP6.65□□□□□ -1.35
TSPAN17-202ENST00000310032 DSTQ03001 7570 aaKnown RBP6.61□□□□□ -1.35
TSPAN17-202ENST00000310032 KRTAP4-3Q9BYR4 195 aa6.6□□□□□ -1.35
TSPAN17-202ENST00000310032 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.36
TSPAN17-202ENST00000310032 SYNE2Q8WXH0 6885 aaKnown RBP6.52□□□□□ -1.37
TSPAN17-202ENST00000310032 LOC100996750A0A140TA64 210 aa6.5□□□□□ -1.37
TSPAN17-202ENST00000310032 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
TSPAN17-202ENST00000310032 MT1GP13640 62 aa6.38□□□□□ -1.39
TSPAN17-202ENST00000310032 KRTAP19-3Q7Z4W3 81 aa6.38□□□□□ -1.39
TSPAN17-202ENST00000310032 SPRR2FQ96RM1 72 aa6.37□□□□□ -1.39
TSPAN17-202ENST00000310032 MT1MQ8N339 61 aa6.37□□□□□ -1.39
TSPAN17-202ENST00000310032 MDN1Q9NU22 5596 aa6.36□□□□□ -1.39
TSPAN17-202ENST00000310032 KRTAP12-4P60329 112 aa6.27□□□□□ -1.41
TSPAN17-202ENST00000310032 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
TSPAN17-202ENST00000310032 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
TSPAN17-202ENST00000310032 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
TSPAN17-202ENST00000310032 KRTAP5-9P26371 169 aa6.01□□□□□ -1.45
TSPAN17-202ENST00000310032 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
TSPAN17-202ENST00000310032 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.98□□□□□ -1.45
TSPAN17-202ENST00000310032 KRTAP4-9Q9BYQ8 210 aa5.98□□□□□ -1.45
TSPAN17-202ENST00000310032 LCE1AQ5T7P2 110 aa5.96□□□□□ -1.46
TSPAN17-202ENST00000310032 SPRR2EP22531 72 aa5.86□□□□□ -1.47
TSPAN17-202ENST00000310032 SPRR2BP35325 72 aa5.86□□□□□ -1.47
TSPAN17-202ENST00000310032 SPRR2AP35326 72 aa5.86□□□□□ -1.47
TSPAN17-202ENST00000310032 KRTAP6-3Q3LI67 103 aa5.83□□□□□ -1.48
TSPAN17-202ENST00000310032 KRTAP6-1Q3LI64 71 aa5.78□□□□□ -1.48
TSPAN17-202ENST00000310032 MT1AP04731 61 aa5.76□□□□□ -1.49
TSPAN17-202ENST00000310032 LCE3DQ9BYE3 92 aa5.68□□□□□ -1.5
TSPAN17-202ENST00000310032 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
TSPAN17-202ENST00000310032 OBSCNQ5VST9 7968 aa5.65□□□□□ -1.51
TSPAN17-202ENST00000310032 LCE3EQ5T5B0 92 aa5.63□□□□□ -1.51
TSPAN17-202ENST00000310032 KRTAP5-5Q701N2 237 aaPredicted RBP5.63□□□□□ -1.51
TSPAN17-202ENST00000310032 SPRR2DP22532 72 aa5.63□□□□□ -1.51
TSPAN17-202ENST00000310032 PRM1P04553 51 aa5.6□□□□□ -1.51
TSPAN17-202ENST00000310032 NEBP20929 6669 aa5.51□□□□□ -1.53
TSPAN17-202ENST00000310032 KRTAP6-2Q3LI66 62 aa5.33□□□□□ -1.56
TSPAN17-202ENST00000310032 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
TSPAN17-202ENST00000310032 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.59
TSPAN17-202ENST00000310032 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
TSPAN17-202ENST00000310032 KRTAP5-4Q6L8H1 288 aa5.05□□□□□ -1.6
TSPAN17-202ENST00000310032 MT3P25713 68 aa5.03□□□□□ -1.6
TSPAN17-202ENST00000310032 MT4P47944 62 aa5.03□□□□□ -1.6
TSPAN17-202ENST00000310032 KRTAP20-1Q3LI63 56 aa5.01□□□□□ -1.61
TSPAN17-202ENST00000310032 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
TSPAN17-202ENST00000310032 LCE4AQ5TA78 99 aa4.9□□□□□ -1.62
TSPAN17-202ENST00000310032 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
TSPAN17-202ENST00000310032 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
TSPAN17-202ENST00000310032 KRTAP5-2Q701N4 177 aa4.66□□□□□ -1.66
TSPAN17-202ENST00000310032 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
TSPAN17-202ENST00000310032 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
TSPAN17-202ENST00000310032 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
TSPAN17-202ENST00000310032 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
TSPAN17-202ENST00000310032 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
TSPAN17-202ENST00000310032 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
TSPAN17-202ENST00000310032 AHNAK2Q8IVF2 5795 aa4.17□□□□□ -1.74
TSPAN17-202ENST00000310032 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
TSPAN17-202ENST00000310032 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
TSPAN17-202ENST00000310032 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
TSPAN17-202ENST00000310032 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
TSPAN17-202ENST00000310032 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
TSPAN17-202ENST00000310032 KRTAP9-9Q9BYP9 154 aa3.87□□□□□ -1.79
TSPAN17-202ENST00000310032 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
TSPAN17-202ENST00000310032 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
TSPAN17-202ENST00000310032 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
TSPAN17-202ENST00000310032 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
TSPAN17-202ENST00000310032 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
TSPAN17-202ENST00000310032 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
TSPAN17-202ENST00000310032 KRTAP21-1Q3LI58 79 aa3.52□□□□□ -1.85
TSPAN17-202ENST00000310032 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
TSPAN17-202ENST00000310032 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
TSPAN17-202ENST00000310032 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
TSPAN17-202ENST00000310032 AHNAKQ09666 5890 aaKnown RBP3.2□□□□□ -1.9
TSPAN17-202ENST00000310032 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
TSPAN17-202ENST00000310032 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 99.9 ms