RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 KRTAP19-4Q3LI73 84 aa6.83□□□□□ -1.32
LRFN4-201ENST00000309602 MACF1Q9UPN3 7388 aaKnown RBP6.82□□□□□ -1.32
LRFN4-201ENST00000309602 SYNE2Q8WXH0 6885 aaKnown RBP6.69□□□□□ -1.34
LRFN4-201ENST00000309602 KRTAP2-3P0C7H8 128 aa6.62□□□□□ -1.35
LRFN4-201ENST00000309602 KRTAP2-4Q9BYR9 128 aa6.62□□□□□ -1.35
LRFN4-201ENST00000309602 KRTAP2-1Q9BYU5 128 aa6.62□□□□□ -1.35
LRFN4-201ENST00000309602 MUC12Q9UKN1 5478 aa6.6□□□□□ -1.35
LRFN4-201ENST00000309602 KRTAP4-3Q9BYR4 195 aa6.56□□□□□ -1.36
LRFN4-201ENST00000309602 KRTAP19-3Q7Z4W3 81 aa6.52□□□□□ -1.36
LRFN4-201ENST00000309602 KRTAP9-6A0A140TA67 174 aa6.52□□□□□ -1.37
LRFN4-201ENST00000309602 MT1MQ8N339 61 aa6.5□□□□□ -1.37
LRFN4-201ENST00000309602 LOC100996750A0A140TA64 210 aa6.48□□□□□ -1.37
LRFN4-201ENST00000309602 MT1GP13640 62 aa6.48□□□□□ -1.37
LRFN4-201ENST00000309602 SPRR2FQ96RM1 72 aa6.41□□□□□ -1.38
LRFN4-201ENST00000309602 MDN1Q9NU22 5596 aa6.35□□□□□ -1.39
LRFN4-201ENST00000309602 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.34□□□□□ -1.39
LRFN4-201ENST00000309602 LCE5AQ5TCM9 118 aa6.33□□□□□ -1.4
LRFN4-201ENST00000309602 KRTAP5-9P26371 169 aa6.22□□□□□ -1.41
LRFN4-201ENST00000309602 DSTQ03001 7570 aaKnown RBP6.2□□□□□ -1.42
LRFN4-201ENST00000309602 KRTAP6-3Q3LI67 103 aa6.1□□□□□ -1.43
LRFN4-201ENST00000309602 LCE1AQ5T7P2 110 aa6.09□□□□□ -1.43
LRFN4-201ENST00000309602 SPRR2EP22531 72 aa6.06□□□□□ -1.44
LRFN4-201ENST00000309602 SPRR2BP35325 72 aa6.06□□□□□ -1.44
LRFN4-201ENST00000309602 SPRR2AP35326 72 aa6.06□□□□□ -1.44
LRFN4-201ENST00000309602 KRTAP9-7A8MTY7 169 aa5.99□□□□□ -1.45
LRFN4-201ENST00000309602 LCE3BQ5TA77 95 aa5.9□□□□□ -1.47
LRFN4-201ENST00000309602 KRTAP6-1Q3LI64 71 aa5.87□□□□□ -1.47
LRFN4-201ENST00000309602 NEBP20929 6669 aa5.86□□□□□ -1.47
LRFN4-201ENST00000309602 MT1AP04731 61 aa5.82□□□□□ -1.48
LRFN4-201ENST00000309602 SPRR2DP22532 72 aa5.82□□□□□ -1.48
LRFN4-201ENST00000309602 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
LRFN4-201ENST00000309602 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
LRFN4-201ENST00000309602 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
LRFN4-201ENST00000309602 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
LRFN4-201ENST00000309602 LCE3DQ9BYE3 92 aa5.51□□□□□ -1.53
LRFN4-201ENST00000309602 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
LRFN4-201ENST00000309602 LCE3EQ5T5B0 92 aa5.42□□□□□ -1.54
LRFN4-201ENST00000309602 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
LRFN4-201ENST00000309602 KRTAP20-1Q3LI63 56 aa5.27□□□□□ -1.57
LRFN4-201ENST00000309602 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
LRFN4-201ENST00000309602 MT3P25713 68 aa5.22□□□□□ -1.57
LRFN4-201ENST00000309602 KRTAP5-4Q6L8H1 288 aa5.18□□□□□ -1.58
LRFN4-201ENST00000309602 MT4P47944 62 aa5.15□□□□□ -1.59
LRFN4-201ENST00000309602 PRM1P04553 51 aa5.11□□□□□ -1.59
LRFN4-201ENST00000309602 KRTAP4-6Q9BYQ5 205 aa5.11□□□□□ -1.59
LRFN4-201ENST00000309602 HMCN1Q96RW7 5635 aa5.06□□□□□ -1.6
LRFN4-201ENST00000309602 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
LRFN4-201ENST00000309602 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
LRFN4-201ENST00000309602 LCE1DQ5T752 114 aa5□□□□□ -1.61
LRFN4-201ENST00000309602 KRTAP20-2Q3LI61 65 aa4.91□□□□□ -1.62
LRFN4-201ENST00000309602 KRTAP5-2Q701N4 177 aa4.8□□□□□ -1.64
LRFN4-201ENST00000309602 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
LRFN4-201ENST00000309602 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
LRFN4-201ENST00000309602 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
LRFN4-201ENST00000309602 MUC5ACP98088 5654 aa4.39□□□□□ -1.71
LRFN4-201ENST00000309602 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
LRFN4-201ENST00000309602 LCE1BQ5T7P3 118 aa4.23□□□□□ -1.73
LRFN4-201ENST00000309602 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
LRFN4-201ENST00000309602 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
LRFN4-201ENST00000309602 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
LRFN4-201ENST00000309602 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
LRFN4-201ENST00000309602 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
LRFN4-201ENST00000309602 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
LRFN4-201ENST00000309602 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
LRFN4-201ENST00000309602 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.8
LRFN4-201ENST00000309602 KRTAP21-2Q3LI59 83 aa3.8□□□□□ -1.8
LRFN4-201ENST00000309602 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
LRFN4-201ENST00000309602 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.82
LRFN4-201ENST00000309602 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
LRFN4-201ENST00000309602 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
LRFN4-201ENST00000309602 KRTAP4-4Q9BYR3 166 aa3.46□□□□□ -1.86
LRFN4-201ENST00000309602 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
LRFN4-201ENST00000309602 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
LRFN4-201ENST00000309602 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
LRFN4-201ENST00000309602 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
LRFN4-201ENST00000309602 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
LRFN4-201ENST00000309602 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms