RNA–Protein interactions for RNA: ENST00000307961.10

RPL4-201, Transcript of ribosomal protein L4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL4, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-201ENST00000307961 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
RPL4-201ENST00000307961 CRCT1Q9UGL9 99 aa3.63□□□□□ -1.83
RPL4-201ENST00000307961 KRTAP9-6A0A140TA67 174 aa3.59□□□□□ -1.83
RPL4-201ENST00000307961 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
RPL4-201ENST00000307961 LOC100996750A0A140TA64 210 aa3.55□□□□□ -1.84
RPL4-201ENST00000307961 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
RPL4-201ENST00000307961 KRTAP4-3Q9BYR4 195 aa3.51□□□□□ -1.85
RPL4-201ENST00000307961 MT1GP13640 62 aa3.49□□□□□ -1.85
RPL4-201ENST00000307961 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
RPL4-201ENST00000307961 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
RPL4-201ENST00000307961 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
RPL4-201ENST00000307961 MUC12Q9UKN1 5478 aa3.42□□□□□ -1.86
RPL4-201ENST00000307961 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.86
RPL4-201ENST00000307961 MT1MQ8N339 61 aa3.4□□□□□ -1.87
RPL4-201ENST00000307961 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
RPL4-201ENST00000307961 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
RPL4-201ENST00000307961 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
RPL4-201ENST00000307961 LCE4AQ5TA78 99 aa3.34□□□□□ -1.87
RPL4-201ENST00000307961 LCE3BQ5TA77 95 aa3.28□□□□□ -1.89
RPL4-201ENST00000307961 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
RPL4-201ENST00000307961 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
RPL4-201ENST00000307961 KRTAP9-7A8MTY7 169 aa3.26□□□□□ -1.89
RPL4-201ENST00000307961 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
RPL4-201ENST00000307961 LCE5AQ5TCM9 118 aa3.23□□□□□ -1.89
RPL4-201ENST00000307961 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
RPL4-201ENST00000307961 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
RPL4-201ENST00000307961 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
RPL4-201ENST00000307961 SPRR2FQ96RM1 72 aa3.18□□□□□ -1.9
RPL4-201ENST00000307961 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
RPL4-201ENST00000307961 MT1AP04731 61 aa3.16□□□□□ -1.9
RPL4-201ENST00000307961 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
RPL4-201ENST00000307961 NEBP20929 6669 aa3.13□□□□□ -1.91
RPL4-201ENST00000307961 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
RPL4-201ENST00000307961 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
RPL4-201ENST00000307961 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
RPL4-201ENST00000307961 PRM1P04553 51 aa3.07□□□□□ -1.92
RPL4-201ENST00000307961 LCE1AQ5T7P2 110 aa3.03□□□□□ -1.92
RPL4-201ENST00000307961 SPRR2EP22531 72 aa3.01□□□□□ -1.93
RPL4-201ENST00000307961 SPRR2BP35325 72 aa3.01□□□□□ -1.93
RPL4-201ENST00000307961 SPRR2AP35326 72 aa3.01□□□□□ -1.93
RPL4-201ENST00000307961 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.93
RPL4-201ENST00000307961 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
RPL4-201ENST00000307961 SPRR2DP22532 72 aa2.91□□□□□ -1.94
RPL4-201ENST00000307961 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
RPL4-201ENST00000307961 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
RPL4-201ENST00000307961 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
RPL4-201ENST00000307961 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.97
RPL4-201ENST00000307961 MT3P25713 68 aa2.75□□□□□ -1.97
RPL4-201ENST00000307961 LCE1DQ5T752 114 aa2.73□□□□□ -1.97
RPL4-201ENST00000307961 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
RPL4-201ENST00000307961 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
RPL4-201ENST00000307961 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
RPL4-201ENST00000307961 MT4P47944 62 aa2.54□□□□□ -2
RPL4-201ENST00000307961 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
RPL4-201ENST00000307961 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
RPL4-201ENST00000307961 KRTAP5-3Q6L8H2 238 aa2.48□□□□□ -2.01
RPL4-201ENST00000307961 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
RPL4-201ENST00000307961 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
RPL4-201ENST00000307961 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
RPL4-201ENST00000307961 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
RPL4-201ENST00000307961 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
RPL4-201ENST00000307961 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
RPL4-201ENST00000307961 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
RPL4-201ENST00000307961 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
RPL4-201ENST00000307961 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
RPL4-201ENST00000307961 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
RPL4-201ENST00000307961 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
RPL4-201ENST00000307961 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
RPL4-201ENST00000307961 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
RPL4-201ENST00000307961 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
RPL4-201ENST00000307961 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
RPL4-201ENST00000307961 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
RPL4-201ENST00000307961 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.1
RPL4-201ENST00000307961 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
RPL4-201ENST00000307961 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
RPL4-201ENST00000307961 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
RPL4-201ENST00000307961 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 251.3 ms