RNA–Protein interactions for RNA: ENST00000307731.1

CDC40-201, Transcript of cell division cycle 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC40, Length 3,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-201ENST00000307731 LOC100996750A0A140TA64 210 aa2.81□□□□□ -1.96
CDC40-201ENST00000307731 LCE3BQ5TA77 95 aa2.81□□□□□ -1.96
CDC40-201ENST00000307731 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
CDC40-201ENST00000307731 SSPOA2VEC9 5147 aa2.8□□□□□ -1.96
CDC40-201ENST00000307731 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
CDC40-201ENST00000307731 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
CDC40-201ENST00000307731 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
CDC40-201ENST00000307731 MT3P25713 68 aa2.72□□□□□ -1.97
CDC40-201ENST00000307731 SPRR2EP22531 72 aa2.69□□□□□ -1.98
CDC40-201ENST00000307731 SPRR2BP35325 72 aa2.69□□□□□ -1.98
CDC40-201ENST00000307731 SPRR2AP35326 72 aa2.69□□□□□ -1.98
CDC40-201ENST00000307731 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
CDC40-201ENST00000307731 MT1EP04732 61 aa2.65□□□□□ -1.99
CDC40-201ENST00000307731 KRTAP19-7Q3SYF9 63 aa2.63□□□□□ -1.99
CDC40-201ENST00000307731 KMT2DO14686 5537 aa2.62□□□□□ -1.99
CDC40-201ENST00000307731 KRTAP6-3Q3LI67 103 aa2.62□□□□□ -1.99
CDC40-201ENST00000307731 KRTAP19-3Q7Z4W3 81 aa2.61□□□□□ -1.99
CDC40-201ENST00000307731 KRTAP2-2Q9BYT5 123 aa2.61□□□□□ -1.99
CDC40-201ENST00000307731 INE1O15225 51 aa2.61□□□□□ -1.99
CDC40-201ENST00000307731 MT1GP13640 62 aa2.61□□□□□ -1.99
CDC40-201ENST00000307731 MT1LQ93083 61 aa2.6□□□□□ -1.99
CDC40-201ENST00000307731 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
CDC40-201ENST00000307731 SPRR2DP22532 72 aa2.6□□□□□ -1.99
CDC40-201ENST00000307731 LCE1DQ5T752 114 aa2.57□□□□□ -2
CDC40-201ENST00000307731 SYNE2Q8WXH0 6885 aaKnown RBP2.54□□□□□ -2
CDC40-201ENST00000307731 KRTAP4-7Q9BYR0 210 aa2.53□□□□□ -2
CDC40-201ENST00000307731 MT1MQ8N339 61 aa2.53□□□□□ -2
CDC40-201ENST00000307731 SPRR5A0A1B0GTR4 108 aa2.52□□□□□ -2.01
CDC40-201ENST00000307731 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
CDC40-201ENST00000307731 MUC12Q9UKN1 5478 aa2.5□□□□□ -2.01
CDC40-201ENST00000307731 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
CDC40-201ENST00000307731 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
CDC40-201ENST00000307731 KRTAP4-11Q9BYQ6 195 aa2.44□□□□□ -2.02
CDC40-201ENST00000307731 DSTQ03001 7570 aaKnown RBP2.39□□□□□ -2.03
CDC40-201ENST00000307731 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
CDC40-201ENST00000307731 KRTAP4-9Q9BYQ8 210 aa2.39□□□□□ -2.03
CDC40-201ENST00000307731 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
CDC40-201ENST00000307731 KRTAP2-3P0C7H8 128 aa2.37□□□□□ -2.03
CDC40-201ENST00000307731 KRTAP2-4Q9BYR9 128 aa2.37□□□□□ -2.03
CDC40-201ENST00000307731 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
CDC40-201ENST00000307731 KRTAP2-1Q9BYU5 128 aa2.31□□□□□ -2.04
CDC40-201ENST00000307731 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
CDC40-201ENST00000307731 NEBP20929 6669 aa2.3□□□□□ -2.04
CDC40-201ENST00000307731 KRTAP9-6A8MVA2 160 aa2.3□□□□□ -2.04
CDC40-201ENST00000307731 LCE1EQ5T753 118 aa2.29□□□□□ -2.04
CDC40-201ENST00000307731 MT4P47944 62 aa2.28□□□□□ -2.04
CDC40-201ENST00000307731 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
CDC40-201ENST00000307731 MT1AP04731 61 aa2.24□□□□□ -2.05
CDC40-201ENST00000307731 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
CDC40-201ENST00000307731 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
CDC40-201ENST00000307731 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
CDC40-201ENST00000307731 KRTAP6-1Q3LI64 71 aa2.19□□□□□ -2.06
CDC40-201ENST00000307731 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
CDC40-201ENST00000307731 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.07
CDC40-201ENST00000307731 OBSCNQ5VST9 7968 aa2.08□□□□□ -2.08
CDC40-201ENST00000307731 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
CDC40-201ENST00000307731 KRTAP5-4Q6L8H1 288 aa2.05□□□□□ -2.08
CDC40-201ENST00000307731 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
CDC40-201ENST00000307731 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
CDC40-201ENST00000307731 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
CDC40-201ENST00000307731 PRM1P04553 51 aa1.82□□□□□ -2.12
CDC40-201ENST00000307731 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
CDC40-201ENST00000307731 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
CDC40-201ENST00000307731 KRTAP5-10Q6L8G5 202 aa1.67□□□□□ -2.14
CDC40-201ENST00000307731 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
CDC40-201ENST00000307731 MUC5ACP98088 5654 aa1.65□□□□□ -2.14
CDC40-201ENST00000307731 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
CDC40-201ENST00000307731 KRTAP5-1Q6L8H4 278 aa1.61□□□□□ -2.15
CDC40-201ENST00000307731 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
CDC40-201ENST00000307731 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
CDC40-201ENST00000307731 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
CDC40-201ENST00000307731 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
CDC40-201ENST00000307731 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
CDC40-201ENST00000307731 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
CDC40-201ENST00000307731 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
CDC40-201ENST00000307731 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
CDC40-201ENST00000307731 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 93.4 ms