RNA–Protein interactions for RNA: ENST00000307588.7

CCDC110-201, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC110, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-201ENST00000307588 SYNE2Q8WXH0 6885 aaKnown RBP5.66□□□□□ -1.5
CCDC110-201ENST00000307588 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
CCDC110-201ENST00000307588 KRTAP9-6A8MVA2 160 aa5.58□□□□□ -1.52
CCDC110-201ENST00000307588 KRTAP5-9P26371 169 aa5.57□□□□□ -1.52
CCDC110-201ENST00000307588 MT1GP13640 62 aa5.57□□□□□ -1.52
CCDC110-201ENST00000307588 KRTAP9-6A0A140TA67 174 aa5.55□□□□□ -1.52
CCDC110-201ENST00000307588 MT1MQ8N339 61 aa5.55□□□□□ -1.52
CCDC110-201ENST00000307588 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
CCDC110-201ENST00000307588 KRTAP4-3Q9BYR4 195 aa5.53□□□□□ -1.52
CCDC110-201ENST00000307588 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.49□□□□□ -1.53
CCDC110-201ENST00000307588 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
CCDC110-201ENST00000307588 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
CCDC110-201ENST00000307588 KRTAP6-3Q3LI67 103 aa5.37□□□□□ -1.55
CCDC110-201ENST00000307588 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
CCDC110-201ENST00000307588 SPRR2EP22531 72 aa5.33□□□□□ -1.56
CCDC110-201ENST00000307588 SPRR2BP35325 72 aa5.33□□□□□ -1.56
CCDC110-201ENST00000307588 SPRR2AP35326 72 aa5.33□□□□□ -1.56
CCDC110-201ENST00000307588 DSTQ03001 7570 aaKnown RBP5.29□□□□□ -1.56
CCDC110-201ENST00000307588 H3BS24 57 aa5.29□□□□□ -1.56
CCDC110-201ENST00000307588 KRTAP2-3P0C7H8 128 aa5.16□□□□□ -1.58
CCDC110-201ENST00000307588 KRTAP2-4Q9BYR9 128 aa5.16□□□□□ -1.58
CCDC110-201ENST00000307588 KRTAP2-1Q9BYU5 128 aa5.16□□□□□ -1.58
CCDC110-201ENST00000307588 SPRR2DP22532 72 aa5.12□□□□□ -1.59
CCDC110-201ENST00000307588 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
CCDC110-201ENST00000307588 NEBP20929 6669 aa5.05□□□□□ -1.6
CCDC110-201ENST00000307588 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
CCDC110-201ENST00000307588 A0A0A0MQY5 61 aa5.01□□□□□ -1.61
CCDC110-201ENST00000307588 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
CCDC110-201ENST00000307588 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
CCDC110-201ENST00000307588 MT1AP04731 61 aa4.91□□□□□ -1.62
CCDC110-201ENST00000307588 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
CCDC110-201ENST00000307588 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
CCDC110-201ENST00000307588 INE1O15225 51 aa4.69□□□□□ -1.66
CCDC110-201ENST00000307588 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
CCDC110-201ENST00000307588 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
CCDC110-201ENST00000307588 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
CCDC110-201ENST00000307588 KRTAP4-6Q9BYQ5 205 aa4.56□□□□□ -1.68
CCDC110-201ENST00000307588 KRTAP12-4P60329 112 aa4.53□□□□□ -1.68
CCDC110-201ENST00000307588 KRTAP20-1Q3LI63 56 aa4.52□□□□□ -1.69
CCDC110-201ENST00000307588 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
CCDC110-201ENST00000307588 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
CCDC110-201ENST00000307588 MT4P47944 62 aa4.48□□□□□ -1.69
CCDC110-201ENST00000307588 MT3P25713 68 aa4.41□□□□□ -1.7
CCDC110-201ENST00000307588 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
CCDC110-201ENST00000307588 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
CCDC110-201ENST00000307588 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
CCDC110-201ENST00000307588 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
CCDC110-201ENST00000307588 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
CCDC110-201ENST00000307588 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
CCDC110-201ENST00000307588 KRTAP5-3Q6L8H2 238 aa4.24□□□□□ -1.73
CCDC110-201ENST00000307588 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
CCDC110-201ENST00000307588 PRM1P04553 51 aa3.81□□□□□ -1.8
CCDC110-201ENST00000307588 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
CCDC110-201ENST00000307588 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
CCDC110-201ENST00000307588 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
CCDC110-201ENST00000307588 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
CCDC110-201ENST00000307588 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
CCDC110-201ENST00000307588 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
CCDC110-201ENST00000307588 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
CCDC110-201ENST00000307588 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
CCDC110-201ENST00000307588 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
CCDC110-201ENST00000307588 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
CCDC110-201ENST00000307588 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.85
CCDC110-201ENST00000307588 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
CCDC110-201ENST00000307588 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
CCDC110-201ENST00000307588 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
CCDC110-201ENST00000307588 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
CCDC110-201ENST00000307588 KRTAP21-2Q3LI59 83 aa3.22□□□□□ -1.89
CCDC110-201ENST00000307588 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.91
CCDC110-201ENST00000307588 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
CCDC110-201ENST00000307588 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CCDC110-201ENST00000307588 AHNAKQ09666 5890 aaKnown RBP2.78□□□□□ -1.96
CCDC110-201ENST00000307588 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
CCDC110-201ENST00000307588 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
CCDC110-201ENST00000307588 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
CCDC110-201ENST00000307588 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
CCDC110-201ENST00000307588 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 262.2 ms