RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 TNP1P09430 55 aa7.08□□□□□ -1.28
RER1-201ENST00000306256 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
RER1-201ENST00000306256 KRTAP5-10Q6L8G5 202 aa6.97□□□□□ -1.29
RER1-201ENST00000306256 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
RER1-201ENST00000306256 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
RER1-201ENST00000306256 PRR15LQ9BU68 103 aa6.81□□□□□ -1.32
RER1-201ENST00000306256 ANAPC13Q9BS18 74 aa6.79□□□□□ -1.32
RER1-201ENST00000306256 KRTAP5-3Q6L8H2 238 aa6.76□□□□□ -1.33
RER1-201ENST00000306256 KRTAP20-2Q3LI61 65 aa6.73□□□□□ -1.33
RER1-201ENST00000306256 KRTAP5-7Q6L8G8 165 aa6.72□□□□□ -1.33
RER1-201ENST00000306256 KRTAP5-5Q701N2 237 aaPredicted RBP6.72□□□□□ -1.33
RER1-201ENST00000306256 CCDC179H3BU77 68 aa6.7□□□□□ -1.34
RER1-201ENST00000306256 LINC01558Q9Y6Z2 57 aa6.7□□□□□ -1.34
RER1-201ENST00000306256 ATP5EP56381 51 aaPredicted RBP6.64□□□□□ -1.35
RER1-201ENST00000306256 SPRR5A0A1B0GTR4 108 aa6.63□□□□□ -1.35
RER1-201ENST00000306256 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
RER1-201ENST00000306256 KRTAP12-4P60329 112 aa6.59□□□□□ -1.35
RER1-201ENST00000306256 UQCR11O14957 56 aa6.58□□□□□ -1.36
RER1-201ENST00000306256 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
RER1-201ENST00000306256 SYNE1Q8NF91 8797 aaKnown RBP6.44□□□□□ -1.38
RER1-201ENST00000306256 MIR22HGQ0VDD5 57 aa6.42□□□□□ -1.38
RER1-201ENST00000306256 TMEM258P61165 79 aa6.37□□□□□ -1.39
RER1-201ENST00000306256 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
RER1-201ENST00000306256 K7ERS5 55 aa6.33□□□□□ -1.4
RER1-201ENST00000306256 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
RER1-201ENST00000306256 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
RER1-201ENST00000306256 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
RER1-201ENST00000306256 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
RER1-201ENST00000306256 PSPHP1O15172 72 aa6.19□□□□□ -1.42
RER1-201ENST00000306256 MT1AP04731 61 aa6.19□□□□□ -1.42
RER1-201ENST00000306256 KRTAP6-1Q3LI64 71 aa6.19□□□□□ -1.42
RER1-201ENST00000306256 KRTAP5-2Q701N4 177 aa6.18□□□□□ -1.42
RER1-201ENST00000306256 V9GYY9 64 aa6.06□□□□□ -1.44
RER1-201ENST00000306256 Q1T7F1 81 aa6.03□□□□□ -1.44
RER1-201ENST00000306256 KRTAP5-8O75690 187 aa6.01□□□□□ -1.45
RER1-201ENST00000306256 KRTAP9-6A8MVA2 160 aa6□□□□□ -1.45
RER1-201ENST00000306256 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
RER1-201ENST00000306256 CDC42SE1Q9NRR8 79 aa5.97□□□□□ -1.45
RER1-201ENST00000306256 KRTAP6-2Q3LI66 62 aa5.96□□□□□ -1.46
RER1-201ENST00000306256 A6NED7 52 aa5.94□□□□□ -1.46
RER1-201ENST00000306256 RPS28P62857 69 aaKnown RBP5.88□□□□□ -1.47
RER1-201ENST00000306256 ROMO1P60602 79 aa5.87□□□□□ -1.47
RER1-201ENST00000306256 AHNAKQ09666 5890 aaKnown RBP5.85□□□□□ -1.47
RER1-201ENST00000306256 MUC5ACP98088 5654 aa5.82□□□□□ -1.48
RER1-201ENST00000306256 MUC5BQ9HC84 5762 aaPredicted RBP5.8□□□□□ -1.48
RER1-201ENST00000306256 OBSCNQ5VST9 7968 aa5.77□□□□□ -1.49
RER1-201ENST00000306256 KRTAP9-9Q9BYP9 154 aa5.73□□□□□ -1.49
RER1-201ENST00000306256 MT3P25713 68 aa5.65□□□□□ -1.5
RER1-201ENST00000306256 KRTAP5-1Q6L8H4 278 aa5.59□□□□□ -1.51
RER1-201ENST00000306256 LCE1EQ5T753 118 aa5.22□□□□□ -1.57
RER1-201ENST00000306256 H3BS24 57 aa5.15□□□□□ -1.59
RER1-201ENST00000306256 PCP4P48539 62 aa5.04□□□□□ -1.6
RER1-201ENST00000306256 KRTAP4-2Q9BYR5 136 aa5.02□□□□□ -1.61
RER1-201ENST00000306256 LCE1BQ5T7P3 118 aa5.01□□□□□ -1.61
RER1-201ENST00000306256 LCE1CQ5T751 118 aa4.85□□□□□ -1.63
RER1-201ENST00000306256 BRK1Q8WUW1 75 aa4.75□□□□□ -1.65
RER1-201ENST00000306256 KRTAP4-12Q9BQ66 201 aa4.71□□□□□ -1.66
RER1-201ENST00000306256 LCE3DQ9BYE3 92 aa4.47□□□□□ -1.69
RER1-201ENST00000306256 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
RER1-201ENST00000306256 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
RER1-201ENST00000306256 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
RER1-201ENST00000306256 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.38□□□□□ -1.71
RER1-201ENST00000306256 LCE1FQ5T754 118 aa4.34□□□□□ -1.71
RER1-201ENST00000306256 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
RER1-201ENST00000306256 PHGR1C9JFL3 82 aa4.08□□□□□ -1.76
RER1-201ENST00000306256 KRTAP21-2Q3LI59 83 aa4.07□□□□□ -1.76
RER1-201ENST00000306256 SVIPQ8NHG7 77 aa3.98□□□□□ -1.77
RER1-201ENST00000306256 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
RER1-201ENST00000306256 PRO0628Q9UI54 55 aa3.74□□□□□ -1.81
RER1-201ENST00000306256 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
RER1-201ENST00000306256 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
RER1-201ENST00000306256 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
RER1-201ENST00000306256 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
RER1-201ENST00000306256 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
RER1-201ENST00000306256 PRM1P04553 51 aa3.01□□□□□ -1.93
RER1-201ENST00000306256 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
RER1-201ENST00000306256 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
RER1-201ENST00000306256 INE1O15225 51 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 64 ms