RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
CSDC2-201ENST00000306149 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
CSDC2-201ENST00000306149 MUC12Q9UKN1 5478 aa5.12□□□□□ -1.59
CSDC2-201ENST00000306149 KRTAP19-6Q3LI70 58 aa5.1□□□□□ -1.59
CSDC2-201ENST00000306149 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
CSDC2-201ENST00000306149 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
CSDC2-201ENST00000306149 LOC100996750A0A140TA64 210 aa5.04□□□□□ -1.6
CSDC2-201ENST00000306149 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
CSDC2-201ENST00000306149 DSTQ03001 7570 aaKnown RBP4.97□□□□□ -1.61
CSDC2-201ENST00000306149 MT1GP13640 62 aa4.96□□□□□ -1.62
CSDC2-201ENST00000306149 MT1MQ8N339 61 aa4.89□□□□□ -1.63
CSDC2-201ENST00000306149 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
CSDC2-201ENST00000306149 MACF1Q9UPN3 7388 aaKnown RBP4.79□□□□□ -1.64
CSDC2-201ENST00000306149 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
CSDC2-201ENST00000306149 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
CSDC2-201ENST00000306149 SYNE2Q8WXH0 6885 aaKnown RBP4.71□□□□□ -1.66
CSDC2-201ENST00000306149 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.65□□□□□ -1.66
CSDC2-201ENST00000306149 MDN1Q9NU22 5596 aa4.65□□□□□ -1.67
CSDC2-201ENST00000306149 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
CSDC2-201ENST00000306149 LCE3BQ5TA77 95 aa4.59□□□□□ -1.68
CSDC2-201ENST00000306149 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
CSDC2-201ENST00000306149 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
CSDC2-201ENST00000306149 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
CSDC2-201ENST00000306149 KRTAP4-6Q9BYQ5 205 aa4.51□□□□□ -1.69
CSDC2-201ENST00000306149 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
CSDC2-201ENST00000306149 MT1AP04731 61 aa4.42□□□□□ -1.7
CSDC2-201ENST00000306149 LCE1AQ5T7P2 110 aa4.41□□□□□ -1.7
CSDC2-201ENST00000306149 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
CSDC2-201ENST00000306149 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
CSDC2-201ENST00000306149 SPRR2EP22531 72 aa4.31□□□□□ -1.72
CSDC2-201ENST00000306149 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
CSDC2-201ENST00000306149 SPRR2BP35325 72 aa4.31□□□□□ -1.72
CSDC2-201ENST00000306149 SPRR2AP35326 72 aa4.31□□□□□ -1.72
CSDC2-201ENST00000306149 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
CSDC2-201ENST00000306149 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
CSDC2-201ENST00000306149 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
CSDC2-201ENST00000306149 NEBP20929 6669 aa4.25□□□□□ -1.73
CSDC2-201ENST00000306149 LCE3EQ5T5B0 92 aa4.22□□□□□ -1.73
CSDC2-201ENST00000306149 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.74
CSDC2-201ENST00000306149 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
CSDC2-201ENST00000306149 SPRR2DP22532 72 aa4.11□□□□□ -1.75
CSDC2-201ENST00000306149 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
CSDC2-201ENST00000306149 PRM1P04553 51 aa4.07□□□□□ -1.76
CSDC2-201ENST00000306149 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
CSDC2-201ENST00000306149 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
CSDC2-201ENST00000306149 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
CSDC2-201ENST00000306149 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
CSDC2-201ENST00000306149 MT3P25713 68 aa3.91□□□□□ -1.78
CSDC2-201ENST00000306149 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
CSDC2-201ENST00000306149 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
CSDC2-201ENST00000306149 MT4P47944 62 aa3.7□□□□□ -1.82
CSDC2-201ENST00000306149 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
CSDC2-201ENST00000306149 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
CSDC2-201ENST00000306149 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
CSDC2-201ENST00000306149 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
CSDC2-201ENST00000306149 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
CSDC2-201ENST00000306149 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
CSDC2-201ENST00000306149 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
CSDC2-201ENST00000306149 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
CSDC2-201ENST00000306149 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
CSDC2-201ENST00000306149 AHNAK2Q8IVF2 5795 aa3.27□□□□□ -1.89
CSDC2-201ENST00000306149 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
CSDC2-201ENST00000306149 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
CSDC2-201ENST00000306149 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
CSDC2-201ENST00000306149 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
CSDC2-201ENST00000306149 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
CSDC2-201ENST00000306149 LCE1CQ5T751 118 aa3□□□□□ -1.93
CSDC2-201ENST00000306149 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
CSDC2-201ENST00000306149 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
CSDC2-201ENST00000306149 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
CSDC2-201ENST00000306149 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
CSDC2-201ENST00000306149 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
CSDC2-201ENST00000306149 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
CSDC2-201ENST00000306149 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
CSDC2-201ENST00000306149 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
CSDC2-201ENST00000306149 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
CSDC2-201ENST00000306149 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 152.5 ms