RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
SHCBP1-201ENST00000303383 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
SHCBP1-201ENST00000303383 KRTAP19-3Q7Z4W3 81 aa4.99□□□□□ -1.61
SHCBP1-201ENST00000303383 MUC12Q9UKN1 5478 aa4.97□□□□□ -1.61
SHCBP1-201ENST00000303383 MT1GP13640 62 aa4.96□□□□□ -1.61
SHCBP1-201ENST00000303383 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
SHCBP1-201ENST00000303383 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
SHCBP1-201ENST00000303383 MT1MQ8N339 61 aa4.9□□□□□ -1.63
SHCBP1-201ENST00000303383 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.63
SHCBP1-201ENST00000303383 KRTAP5-9P26371 169 aa4.84□□□□□ -1.63
SHCBP1-201ENST00000303383 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
SHCBP1-201ENST00000303383 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
SHCBP1-201ENST00000303383 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
SHCBP1-201ENST00000303383 SPRR2EP22531 72 aa4.79□□□□□ -1.64
SHCBP1-201ENST00000303383 SPRR2BP35325 72 aa4.79□□□□□ -1.64
SHCBP1-201ENST00000303383 SPRR2AP35326 72 aa4.79□□□□□ -1.64
SHCBP1-201ENST00000303383 LCE1AQ5T7P2 110 aa4.76□□□□□ -1.65
SHCBP1-201ENST00000303383 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
SHCBP1-201ENST00000303383 MDN1Q9NU22 5596 aa4.71□□□□□ -1.65
SHCBP1-201ENST00000303383 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
SHCBP1-201ENST00000303383 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
SHCBP1-201ENST00000303383 SPRR2DP22532 72 aa4.61□□□□□ -1.67
SHCBP1-201ENST00000303383 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
SHCBP1-201ENST00000303383 KRTAP2-3P0C7H8 128 aa4.52□□□□□ -1.69
SHCBP1-201ENST00000303383 KRTAP2-4Q9BYR9 128 aa4.52□□□□□ -1.69
SHCBP1-201ENST00000303383 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
SHCBP1-201ENST00000303383 LCE3BQ5TA77 95 aa4.39□□□□□ -1.71
SHCBP1-201ENST00000303383 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
SHCBP1-201ENST00000303383 MT1AP04731 61 aa4.35□□□□□ -1.71
SHCBP1-201ENST00000303383 NEBP20929 6669 aa4.33□□□□□ -1.72
SHCBP1-201ENST00000303383 KRTAP6-1Q3LI64 71 aa4.33□□□□□ -1.72
SHCBP1-201ENST00000303383 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
SHCBP1-201ENST00000303383 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
SHCBP1-201ENST00000303383 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
SHCBP1-201ENST00000303383 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
SHCBP1-201ENST00000303383 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
SHCBP1-201ENST00000303383 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
SHCBP1-201ENST00000303383 KRTAP12-4P60329 112 aa4.13□□□□□ -1.75
SHCBP1-201ENST00000303383 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
SHCBP1-201ENST00000303383 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
SHCBP1-201ENST00000303383 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
SHCBP1-201ENST00000303383 MT4P47944 62 aa4.03□□□□□ -1.76
SHCBP1-201ENST00000303383 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
SHCBP1-201ENST00000303383 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
SHCBP1-201ENST00000303383 MT3P25713 68 aa3.98□□□□□ -1.77
SHCBP1-201ENST00000303383 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
SHCBP1-201ENST00000303383 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
SHCBP1-201ENST00000303383 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
SHCBP1-201ENST00000303383 KRTAP4-6Q9BYQ5 205 aa3.94□□□□□ -1.78
SHCBP1-201ENST00000303383 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
SHCBP1-201ENST00000303383 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
SHCBP1-201ENST00000303383 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
SHCBP1-201ENST00000303383 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
SHCBP1-201ENST00000303383 PRM1P04553 51 aa3.66□□□□□ -1.82
SHCBP1-201ENST00000303383 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
SHCBP1-201ENST00000303383 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
SHCBP1-201ENST00000303383 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
SHCBP1-201ENST00000303383 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
SHCBP1-201ENST00000303383 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
SHCBP1-201ENST00000303383 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
SHCBP1-201ENST00000303383 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
SHCBP1-201ENST00000303383 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
SHCBP1-201ENST00000303383 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
SHCBP1-201ENST00000303383 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
SHCBP1-201ENST00000303383 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
SHCBP1-201ENST00000303383 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
SHCBP1-201ENST00000303383 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
SHCBP1-201ENST00000303383 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
SHCBP1-201ENST00000303383 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
SHCBP1-201ENST00000303383 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
SHCBP1-201ENST00000303383 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
SHCBP1-201ENST00000303383 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
SHCBP1-201ENST00000303383 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
SHCBP1-201ENST00000303383 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
SHCBP1-201ENST00000303383 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
SHCBP1-201ENST00000303383 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
SHCBP1-201ENST00000303383 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms