RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 MUC12Q9UKN1 5478 aa7.62□□□□□ -1.19
SMAD1-201ENST00000302085 MT1GP13640 62 aa7.6□□□□□ -1.19
SMAD1-201ENST00000302085 SYNE2Q8WXH0 6885 aaKnown RBP7.58□□□□□ -1.2
SMAD1-201ENST00000302085 KRTAP9-6A8MVA2 160 aa7.57□□□□□ -1.2
SMAD1-201ENST00000302085 MT1MQ8N339 61 aa7.55□□□□□ -1.2
SMAD1-201ENST00000302085 KRTAP5-9P26371 169 aa7.53□□□□□ -1.2
SMAD1-201ENST00000302085 KRTAP9-6A0A140TA67 174 aa7.51□□□□□ -1.21
SMAD1-201ENST00000302085 LCE5AQ5TCM9 118 aa7.51□□□□□ -1.21
SMAD1-201ENST00000302085 KRTAP4-3Q9BYR4 195 aa7.5□□□□□ -1.21
SMAD1-201ENST00000302085 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.42□□□□□ -1.22
SMAD1-201ENST00000302085 LCE1AQ5T7P2 110 aa7.37□□□□□ -1.23
SMAD1-201ENST00000302085 H3BS24 57 aa7.33□□□□□ -1.24
SMAD1-201ENST00000302085 KRTAP6-3Q3LI67 103 aa7.3□□□□□ -1.24
SMAD1-201ENST00000302085 LOC100996750A0A140TA64 210 aa7.28□□□□□ -1.24
SMAD1-201ENST00000302085 SPRR2EP22531 72 aa7.25□□□□□ -1.25
SMAD1-201ENST00000302085 SPRR2BP35325 72 aa7.25□□□□□ -1.25
SMAD1-201ENST00000302085 SPRR2AP35326 72 aa7.25□□□□□ -1.25
SMAD1-201ENST00000302085 MDN1Q9NU22 5596 aa7.22□□□□□ -1.25
SMAD1-201ENST00000302085 DSTQ03001 7570 aaKnown RBP7.05□□□□□ -1.28
SMAD1-201ENST00000302085 KRTAP2-3P0C7H8 128 aa7.04□□□□□ -1.28
SMAD1-201ENST00000302085 KRTAP2-4Q9BYR9 128 aa7.04□□□□□ -1.28
SMAD1-201ENST00000302085 KRTAP2-1Q9BYU5 128 aa7.04□□□□□ -1.28
SMAD1-201ENST00000302085 SPRR2DP22532 72 aa6.97□□□□□ -1.29
SMAD1-201ENST00000302085 A0A0A0MQY5 61 aa6.96□□□□□ -1.3
SMAD1-201ENST00000302085 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
SMAD1-201ENST00000302085 NEBP20929 6669 aa6.8□□□□□ -1.32
SMAD1-201ENST00000302085 KRTAP5-5Q701N2 237 aaPredicted RBP6.78□□□□□ -1.32
SMAD1-201ENST00000302085 MT1AP04731 61 aa6.69□□□□□ -1.34
SMAD1-201ENST00000302085 KRTAP6-1Q3LI64 71 aa6.68□□□□□ -1.34
SMAD1-201ENST00000302085 LCE3BQ5TA77 95 aa6.68□□□□□ -1.34
SMAD1-201ENST00000302085 INE1O15225 51 aa6.49□□□□□ -1.37
SMAD1-201ENST00000302085 SYNE1Q8NF91 8797 aaKnown RBP6.4□□□□□ -1.38
SMAD1-201ENST00000302085 KRTAP5-4Q6L8H1 288 aa6.36□□□□□ -1.39
SMAD1-201ENST00000302085 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
SMAD1-201ENST00000302085 KRTAP4-9Q9BYQ8 210 aa6.26□□□□□ -1.41
SMAD1-201ENST00000302085 KRTAP2-2Q9BYT5 123 aa6.22□□□□□ -1.41
SMAD1-201ENST00000302085 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
SMAD1-201ENST00000302085 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
SMAD1-201ENST00000302085 KRTAP20-1Q3LI63 56 aa6.15□□□□□ -1.43
SMAD1-201ENST00000302085 KRTAP6-2Q3LI66 62 aa6.11□□□□□ -1.43
SMAD1-201ENST00000302085 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
SMAD1-201ENST00000302085 MT4P47944 62 aa6.08□□□□□ -1.44
SMAD1-201ENST00000302085 MT3P25713 68 aa6.04□□□□□ -1.44
SMAD1-201ENST00000302085 LCE3DQ9BYE3 92 aa5.97□□□□□ -1.45
SMAD1-201ENST00000302085 KRTAP20-2Q3LI61 65 aa5.95□□□□□ -1.46
SMAD1-201ENST00000302085 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
SMAD1-201ENST00000302085 LCE3EQ5T5B0 92 aa5.83□□□□□ -1.48
SMAD1-201ENST00000302085 HMCN1Q96RW7 5635 aa5.8□□□□□ -1.48
SMAD1-201ENST00000302085 KRTAP5-2Q701N4 177 aa5.8□□□□□ -1.48
SMAD1-201ENST00000302085 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
SMAD1-201ENST00000302085 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
SMAD1-201ENST00000302085 PRM1P04553 51 aa5.2□□□□□ -1.58
SMAD1-201ENST00000302085 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
SMAD1-201ENST00000302085 KRTAP4-11Q9BYQ6 195 aa5.1□□□□□ -1.59
SMAD1-201ENST00000302085 AHNAK2Q8IVF2 5795 aa5.05□□□□□ -1.6
SMAD1-201ENST00000302085 KRTAP5-1Q6L8H4 278 aa5.01□□□□□ -1.61
SMAD1-201ENST00000302085 LCE1BQ5T7P3 118 aa4.93□□□□□ -1.62
SMAD1-201ENST00000302085 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
SMAD1-201ENST00000302085 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
SMAD1-201ENST00000302085 MUC5ACP98088 5654 aa4.88□□□□□ -1.63
SMAD1-201ENST00000302085 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
SMAD1-201ENST00000302085 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
SMAD1-201ENST00000302085 KRTAP5-7Q6L8G8 165 aa4.77□□□□□ -1.65
SMAD1-201ENST00000302085 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
SMAD1-201ENST00000302085 GPR98Q8WXG9 6306 aa4.46□□□□□ -1.7
SMAD1-201ENST00000302085 KRTAP21-2Q3LI59 83 aa4.36□□□□□ -1.71
SMAD1-201ENST00000302085 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
SMAD1-201ENST00000302085 KRTAP5-11Q6L8G4 156 aa4.23□□□□□ -1.73
SMAD1-201ENST00000302085 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.75
SMAD1-201ENST00000302085 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
SMAD1-201ENST00000302085 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
SMAD1-201ENST00000302085 LCE1FQ5T754 118 aa3.73□□□□□ -1.81
SMAD1-201ENST00000302085 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
SMAD1-201ENST00000302085 PHGR1C9JFL3 82 aa3.65□□□□□ -1.82
SMAD1-201ENST00000302085 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
SMAD1-201ENST00000302085 KRTAP21-1Q3LI58 79 aa3.21□□□□□ -1.89
SMAD1-201ENST00000302085 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 149.2 ms