RNA–Protein interactions for RNA: ENST00000301323.7

RECQL4-201, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-201ENST00000301323 MT1MQ8N339 61 aa5.84□□□□□ -1.47
RECQL4-201ENST00000301323 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
RECQL4-201ENST00000301323 UQCR11O14957 56 aa5.74□□□□□ -1.49
RECQL4-201ENST00000301323 KRTAP4-3Q9BYR4 195 aa5.71□□□□□ -1.5
RECQL4-201ENST00000301323 MT4P47944 62 aa5.7□□□□□ -1.5
RECQL4-201ENST00000301323 HMCN1Q96RW7 5635 aa5.7□□□□□ -1.5
RECQL4-201ENST00000301323 LCE4AQ5TA78 99 aa5.66□□□□□ -1.5
RECQL4-201ENST00000301323 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
RECQL4-201ENST00000301323 AHNAK2Q8IVF2 5795 aa5.63□□□□□ -1.51
RECQL4-201ENST00000301323 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
RECQL4-201ENST00000301323 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
RECQL4-201ENST00000301323 SVIPQ8NHG7 77 aa5.57□□□□□ -1.52
RECQL4-201ENST00000301323 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
RECQL4-201ENST00000301323 V9GYY9 64 aa5.57□□□□□ -1.52
RECQL4-201ENST00000301323 KRTAP25-1Q3LHN0 102 aa5.54□□□□□ -1.52
RECQL4-201ENST00000301323 PSPHP1O15172 72 aa5.53□□□□□ -1.52
RECQL4-201ENST00000301323 K7ERS5 55 aa5.52□□□□□ -1.53
RECQL4-201ENST00000301323 Q1T7F1 81 aa5.51□□□□□ -1.53
RECQL4-201ENST00000301323 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
RECQL4-201ENST00000301323 KRTAP5-10Q6L8G5 202 aa5.47□□□□□ -1.53
RECQL4-201ENST00000301323 KRTAP5-5Q701N2 237 aaPredicted RBP5.39□□□□□ -1.55
RECQL4-201ENST00000301323 A6NED7 52 aa5.36□□□□□ -1.55
RECQL4-201ENST00000301323 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
RECQL4-201ENST00000301323 KRTAP5-3Q6L8H2 238 aa5.3□□□□□ -1.56
RECQL4-201ENST00000301323 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
RECQL4-201ENST00000301323 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
RECQL4-201ENST00000301323 KRTAP5-7Q6L8G8 165 aa5.28□□□□□ -1.56
RECQL4-201ENST00000301323 KRTAP20-2Q3LI61 65 aa5.26□□□□□ -1.57
RECQL4-201ENST00000301323 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
RECQL4-201ENST00000301323 RPS28P62857 69 aaKnown RBP5.25□□□□□ -1.57
RECQL4-201ENST00000301323 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
RECQL4-201ENST00000301323 CDC42SE1Q9NRR8 79 aa5.22□□□□□ -1.57
RECQL4-201ENST00000301323 SYNE1Q8NF91 8797 aaKnown RBP5.19□□□□□ -1.58
RECQL4-201ENST00000301323 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
RECQL4-201ENST00000301323 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
RECQL4-201ENST00000301323 ROMO1P60602 79 aa5.13□□□□□ -1.59
RECQL4-201ENST00000301323 MT1AP04731 61 aa4.98□□□□□ -1.61
RECQL4-201ENST00000301323 KRTAP6-1Q3LI64 71 aa4.96□□□□□ -1.62
RECQL4-201ENST00000301323 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
RECQL4-201ENST00000301323 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
RECQL4-201ENST00000301323 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
RECQL4-201ENST00000301323 PRO0628Q9UI54 55 aa4.83□□□□□ -1.64
RECQL4-201ENST00000301323 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
RECQL4-201ENST00000301323 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
RECQL4-201ENST00000301323 AHNAKQ09666 5890 aaKnown RBP4.73□□□□□ -1.65
RECQL4-201ENST00000301323 KRTAP5-8O75690 187 aa4.68□□□□□ -1.66
RECQL4-201ENST00000301323 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
RECQL4-201ENST00000301323 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
RECQL4-201ENST00000301323 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
RECQL4-201ENST00000301323 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
RECQL4-201ENST00000301323 MT3P25713 68 aa4.53□□□□□ -1.68
RECQL4-201ENST00000301323 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
RECQL4-201ENST00000301323 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
RECQL4-201ENST00000301323 KTN1-AS1Q86SY8 53 aa4.43□□□□□ -1.7
RECQL4-201ENST00000301323 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
RECQL4-201ENST00000301323 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
RECQL4-201ENST00000301323 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
RECQL4-201ENST00000301323 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
RECQL4-201ENST00000301323 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
RECQL4-201ENST00000301323 H3BS24 57 aa3.89□□□□□ -1.79
RECQL4-201ENST00000301323 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
RECQL4-201ENST00000301323 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
RECQL4-201ENST00000301323 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
RECQL4-201ENST00000301323 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
RECQL4-201ENST00000301323 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
RECQL4-201ENST00000301323 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
RECQL4-201ENST00000301323 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
RECQL4-201ENST00000301323 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
RECQL4-201ENST00000301323 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
RECQL4-201ENST00000301323 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
RECQL4-201ENST00000301323 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
RECQL4-201ENST00000301323 A0A0A0MQY5 61 aa3.24□□□□□ -1.89
RECQL4-201ENST00000301323 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
RECQL4-201ENST00000301323 INE1O15225 51 aa2.96□□□□□ -1.94
RECQL4-201ENST00000301323 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
RECQL4-201ENST00000301323 PRM1P04553 51 aa2.63□□□□□ -1.99
RECQL4-201ENST00000301323 KRTAP21-1Q3LI58 79 aa2.42□□□□□ -2.02
RECQL4-201ENST00000301323 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms