RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 DSTQ03001 7570 aaKnown RBP5.08□□□□□ -1.6
SMG8-201ENST00000300917 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
SMG8-201ENST00000300917 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
SMG8-201ENST00000300917 KRTAP9-2Q9BYQ4 174 aa4.99□□□□□ -1.61
SMG8-201ENST00000300917 SPRR2FQ96RM1 72 aa4.97□□□□□ -1.61
SMG8-201ENST00000300917 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
SMG8-201ENST00000300917 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
SMG8-201ENST00000300917 MT1GP13640 62 aa4.87□□□□□ -1.63
SMG8-201ENST00000300917 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
SMG8-201ENST00000300917 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
SMG8-201ENST00000300917 MT1MQ8N339 61 aa4.84□□□□□ -1.63
SMG8-201ENST00000300917 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
SMG8-201ENST00000300917 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
SMG8-201ENST00000300917 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
SMG8-201ENST00000300917 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
SMG8-201ENST00000300917 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
SMG8-201ENST00000300917 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
SMG8-201ENST00000300917 SPRR2EP22531 72 aa4.58□□□□□ -1.68
SMG8-201ENST00000300917 SPRR2BP35325 72 aa4.58□□□□□ -1.68
SMG8-201ENST00000300917 SPRR2AP35326 72 aa4.58□□□□□ -1.68
SMG8-201ENST00000300917 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
SMG8-201ENST00000300917 KRTAP5-9P26371 169 aa4.52□□□□□ -1.69
SMG8-201ENST00000300917 LCE3BQ5TA77 95 aa4.46□□□□□ -1.7
SMG8-201ENST00000300917 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
SMG8-201ENST00000300917 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
SMG8-201ENST00000300917 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.71
SMG8-201ENST00000300917 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
SMG8-201ENST00000300917 SPRR2DP22532 72 aa4.38□□□□□ -1.71
SMG8-201ENST00000300917 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
SMG8-201ENST00000300917 KRTAP6-3Q3LI67 103 aa4.3□□□□□ -1.72
SMG8-201ENST00000300917 MT1AP04731 61 aa4.25□□□□□ -1.73
SMG8-201ENST00000300917 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
SMG8-201ENST00000300917 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
SMG8-201ENST00000300917 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
SMG8-201ENST00000300917 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
SMG8-201ENST00000300917 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
SMG8-201ENST00000300917 NEBP20929 6669 aa4.1□□□□□ -1.75
SMG8-201ENST00000300917 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
SMG8-201ENST00000300917 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
SMG8-201ENST00000300917 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
SMG8-201ENST00000300917 MT4P47944 62 aa3.96□□□□□ -1.78
SMG8-201ENST00000300917 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
SMG8-201ENST00000300917 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
SMG8-201ENST00000300917 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.78
SMG8-201ENST00000300917 MT3P25713 68 aa3.85□□□□□ -1.79
SMG8-201ENST00000300917 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
SMG8-201ENST00000300917 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
SMG8-201ENST00000300917 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
SMG8-201ENST00000300917 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
SMG8-201ENST00000300917 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
SMG8-201ENST00000300917 PRM1P04553 51 aa3.69□□□□□ -1.82
SMG8-201ENST00000300917 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
SMG8-201ENST00000300917 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
SMG8-201ENST00000300917 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
SMG8-201ENST00000300917 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
SMG8-201ENST00000300917 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
SMG8-201ENST00000300917 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
SMG8-201ENST00000300917 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
SMG8-201ENST00000300917 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
SMG8-201ENST00000300917 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
SMG8-201ENST00000300917 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
SMG8-201ENST00000300917 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
SMG8-201ENST00000300917 KRTAP5-8O75690 187 aa2.98□□□□□ -1.93
SMG8-201ENST00000300917 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
SMG8-201ENST00000300917 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
SMG8-201ENST00000300917 GPR98Q8WXG9 6306 aa2.89□□□□□ -1.95
SMG8-201ENST00000300917 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
SMG8-201ENST00000300917 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
SMG8-201ENST00000300917 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SMG8-201ENST00000300917 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
SMG8-201ENST00000300917 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
SMG8-201ENST00000300917 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
SMG8-201ENST00000300917 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
SMG8-201ENST00000300917 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
SMG8-201ENST00000300917 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
SMG8-201ENST00000300917 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
SMG8-201ENST00000300917 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 1648.5 ms