RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
SNRPD1-201ENST00000300413 KRTAP4-8A0A0G2JLE6 195 aa2.91□□□□□ -1.94
SNRPD1-201ENST00000300413 KRTAP4-8Q9BYQ9 185 aa2.91□□□□□ -1.94
SNRPD1-201ENST00000300413 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.95
SNRPD1-201ENST00000300413 MT1EP04732 61 aa2.88□□□□□ -1.95
SNRPD1-201ENST00000300413 MT1LQ93083 61 aa2.85□□□□□ -1.95
SNRPD1-201ENST00000300413 SPRR5A0A1B0GTR4 108 aa2.82□□□□□ -1.96
SNRPD1-201ENST00000300413 USH2AO75445 5202 aa2.81□□□□□ -1.96
SNRPD1-201ENST00000300413 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
SNRPD1-201ENST00000300413 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
SNRPD1-201ENST00000300413 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
SNRPD1-201ENST00000300413 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
SNRPD1-201ENST00000300413 LCE1AQ5T7P2 110 aa2.76□□□□□ -1.97
SNRPD1-201ENST00000300413 MT1MQ8N339 61 aa2.76□□□□□ -1.97
SNRPD1-201ENST00000300413 KRTAP19-7Q3SYF9 63 aa2.74□□□□□ -1.97
SNRPD1-201ENST00000300413 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.69□□□□□ -1.98
SNRPD1-201ENST00000300413 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
SNRPD1-201ENST00000300413 LCE3BQ5TA77 95 aa2.67□□□□□ -1.98
SNRPD1-201ENST00000300413 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
SNRPD1-201ENST00000300413 MT3P25713 68 aa2.66□□□□□ -1.98
SNRPD1-201ENST00000300413 KMT2DO14686 5537 aa2.62□□□□□ -1.99
SNRPD1-201ENST00000300413 KRTAP4-7Q9BYR0 210 aa2.61□□□□□ -1.99
SNRPD1-201ENST00000300413 FCGBPQ9Y6R7 5405 aaPredicted RBP2.6□□□□□ -1.99
SNRPD1-201ENST00000300413 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
SNRPD1-201ENST00000300413 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -2
SNRPD1-201ENST00000300413 LCE1FQ5T754 118 aa2.59□□□□□ -2
SNRPD1-201ENST00000300413 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -2
SNRPD1-201ENST00000300413 MT1AP04731 61 aa2.56□□□□□ -2
SNRPD1-201ENST00000300413 KRTAP5-9P26371 169 aa2.55□□□□□ -2
SNRPD1-201ENST00000300413 LOC100996750A0A140TA64 210 aa2.54□□□□□ -2
SNRPD1-201ENST00000300413 KRTAP4-6Q9BYQ5 205 aa2.54□□□□□ -2
SNRPD1-201ENST00000300413 SSPOA2VEC9 5147 aa2.53□□□□□ -2.01
SNRPD1-201ENST00000300413 SYNE2Q8WXH0 6885 aaKnown RBP2.52□□□□□ -2.01
SNRPD1-201ENST00000300413 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
SNRPD1-201ENST00000300413 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
SNRPD1-201ENST00000300413 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
SNRPD1-201ENST00000300413 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
SNRPD1-201ENST00000300413 MUC12Q9UKN1 5478 aa2.5□□□□□ -2.01
SNRPD1-201ENST00000300413 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
SNRPD1-201ENST00000300413 MACF1Q9UPN3 7388 aaKnown RBP2.47□□□□□ -2.01
SNRPD1-201ENST00000300413 MT4P47944 62 aa2.47□□□□□ -2.01
SNRPD1-201ENST00000300413 LCE1DQ5T752 114 aa2.36□□□□□ -2.03
SNRPD1-201ENST00000300413 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.04
SNRPD1-201ENST00000300413 KRTAP6-1Q3LI64 71 aa2.33□□□□□ -2.04
SNRPD1-201ENST00000300413 NEBP20929 6669 aa2.31□□□□□ -2.04
SNRPD1-201ENST00000300413 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
SNRPD1-201ENST00000300413 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
SNRPD1-201ENST00000300413 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
SNRPD1-201ENST00000300413 KRTAP4-9Q9BYQ8 210 aa2.22□□□□□ -2.05
SNRPD1-201ENST00000300413 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
SNRPD1-201ENST00000300413 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
SNRPD1-201ENST00000300413 LCE1EQ5T753 118 aa2.16□□□□□ -2.06
SNRPD1-201ENST00000300413 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
SNRPD1-201ENST00000300413 KRTAP5-4Q6L8H1 288 aa2.11□□□□□ -2.07
SNRPD1-201ENST00000300413 PRM1P04553 51 aa2.1□□□□□ -2.07
SNRPD1-201ENST00000300413 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.08
SNRPD1-201ENST00000300413 KRTAP4-2Q9BYR5 136 aa2.02□□□□□ -2.09
SNRPD1-201ENST00000300413 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
SNRPD1-201ENST00000300413 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SNRPD1-201ENST00000300413 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
SNRPD1-201ENST00000300413 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
SNRPD1-201ENST00000300413 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
SNRPD1-201ENST00000300413 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
SNRPD1-201ENST00000300413 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
SNRPD1-201ENST00000300413 AHNAK2Q8IVF2 5795 aa1.7□□□□□ -2.14
SNRPD1-201ENST00000300413 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
SNRPD1-201ENST00000300413 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
SNRPD1-201ENST00000300413 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
SNRPD1-201ENST00000300413 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
SNRPD1-201ENST00000300413 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
SNRPD1-201ENST00000300413 KRTAP4-4Q9BYR3 166 aa1.54□□□□□ -2.16
SNRPD1-201ENST00000300413 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.16
SNRPD1-201ENST00000300413 KRTAP5-11Q6L8G4 156 aa1.51□□□□□ -2.17
SNRPD1-201ENST00000300413 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
SNRPD1-201ENST00000300413 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
SNRPD1-201ENST00000300413 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
SNRPD1-201ENST00000300413 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 100.3 ms