RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
BCCIP-202ENST00000299130 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
BCCIP-202ENST00000299130 LOC100996750A0A140TA64 210 aa4.52□□□□□ -1.69
BCCIP-202ENST00000299130 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
BCCIP-202ENST00000299130 KRTAP9-6A0A140TA67 174 aa4.45□□□□□ -1.7
BCCIP-202ENST00000299130 MT1GP13640 62 aa4.44□□□□□ -1.7
BCCIP-202ENST00000299130 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
BCCIP-202ENST00000299130 MT1MQ8N339 61 aa4.42□□□□□ -1.7
BCCIP-202ENST00000299130 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.7
BCCIP-202ENST00000299130 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
BCCIP-202ENST00000299130 CRCT1Q9UGL9 99 aa4.35□□□□□ -1.71
BCCIP-202ENST00000299130 LCE5AQ5TCM9 118 aa4.26□□□□□ -1.73
BCCIP-202ENST00000299130 SPRR2FQ96RM1 72 aa4.26□□□□□ -1.73
BCCIP-202ENST00000299130 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
BCCIP-202ENST00000299130 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
BCCIP-202ENST00000299130 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
BCCIP-202ENST00000299130 LCE3BQ5TA77 95 aa4.1□□□□□ -1.75
BCCIP-202ENST00000299130 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
BCCIP-202ENST00000299130 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
BCCIP-202ENST00000299130 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
BCCIP-202ENST00000299130 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
BCCIP-202ENST00000299130 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
BCCIP-202ENST00000299130 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
BCCIP-202ENST00000299130 MT1AP04731 61 aa3.94□□□□□ -1.78
BCCIP-202ENST00000299130 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
BCCIP-202ENST00000299130 KRTAP5-9P26371 169 aa3.93□□□□□ -1.78
BCCIP-202ENST00000299130 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
BCCIP-202ENST00000299130 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.78
BCCIP-202ENST00000299130 SPRR2EP22531 72 aa3.87□□□□□ -1.79
BCCIP-202ENST00000299130 SPRR2BP35325 72 aa3.87□□□□□ -1.79
BCCIP-202ENST00000299130 SPRR2AP35326 72 aa3.87□□□□□ -1.79
BCCIP-202ENST00000299130 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
BCCIP-202ENST00000299130 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
BCCIP-202ENST00000299130 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
BCCIP-202ENST00000299130 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
BCCIP-202ENST00000299130 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
BCCIP-202ENST00000299130 SPRR2DP22532 72 aa3.7□□□□□ -1.82
BCCIP-202ENST00000299130 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
BCCIP-202ENST00000299130 PRM1P04553 51 aa3.63□□□□□ -1.83
BCCIP-202ENST00000299130 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
BCCIP-202ENST00000299130 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
BCCIP-202ENST00000299130 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
BCCIP-202ENST00000299130 MT3P25713 68 aa3.53□□□□□ -1.84
BCCIP-202ENST00000299130 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
BCCIP-202ENST00000299130 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
BCCIP-202ENST00000299130 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
BCCIP-202ENST00000299130 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
BCCIP-202ENST00000299130 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
BCCIP-202ENST00000299130 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
BCCIP-202ENST00000299130 NEBP20929 6669 aa3.33□□□□□ -1.88
BCCIP-202ENST00000299130 MT4P47944 62 aa3.3□□□□□ -1.88
BCCIP-202ENST00000299130 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
BCCIP-202ENST00000299130 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.89
BCCIP-202ENST00000299130 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
BCCIP-202ENST00000299130 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
BCCIP-202ENST00000299130 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
BCCIP-202ENST00000299130 LCE4AQ5TA78 99 aa3.15□□□□□ -1.9
BCCIP-202ENST00000299130 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.92
BCCIP-202ENST00000299130 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
BCCIP-202ENST00000299130 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
BCCIP-202ENST00000299130 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
BCCIP-202ENST00000299130 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
BCCIP-202ENST00000299130 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
BCCIP-202ENST00000299130 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
BCCIP-202ENST00000299130 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
BCCIP-202ENST00000299130 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
BCCIP-202ENST00000299130 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
BCCIP-202ENST00000299130 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
BCCIP-202ENST00000299130 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.56□□□□□ -2
BCCIP-202ENST00000299130 KRTAP5-8O75690 187 aa2.55□□□□□ -2
BCCIP-202ENST00000299130 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
BCCIP-202ENST00000299130 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
BCCIP-202ENST00000299130 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
BCCIP-202ENST00000299130 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
BCCIP-202ENST00000299130 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
BCCIP-202ENST00000299130 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
BCCIP-202ENST00000299130 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 112.4 ms