RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
RPUSD4-201ENST00000298317 MT1GP13640 62 aa4.24□□□□□ -1.73
RPUSD4-201ENST00000298317 SSPOA2VEC9 5147 aa4.2□□□□□ -1.74
RPUSD4-201ENST00000298317 MT1MQ8N339 61 aa4.16□□□□□ -1.74
RPUSD4-201ENST00000298317 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
RPUSD4-201ENST00000298317 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
RPUSD4-201ENST00000298317 KRTAP19-6Q3LI70 58 aa4.04□□□□□ -1.76
RPUSD4-201ENST00000298317 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
RPUSD4-201ENST00000298317 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
RPUSD4-201ENST00000298317 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
RPUSD4-201ENST00000298317 KRTAP6-3Q3LI67 103 aa4.01□□□□□ -1.77
RPUSD4-201ENST00000298317 LCE3BQ5TA77 95 aa4.01□□□□□ -1.77
RPUSD4-201ENST00000298317 MT1AP04731 61 aa4□□□□□ -1.77
RPUSD4-201ENST00000298317 KRTAP9-2Q9BYQ4 174 aa3.99□□□□□ -1.77
RPUSD4-201ENST00000298317 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
RPUSD4-201ENST00000298317 KRTAP9-6A0A140TA67 174 aa3.96□□□□□ -1.78
RPUSD4-201ENST00000298317 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
RPUSD4-201ENST00000298317 PRM1P04553 51 aa3.92□□□□□ -1.78
RPUSD4-201ENST00000298317 LCE1AQ5T7P2 110 aa3.91□□□□□ -1.78
RPUSD4-201ENST00000298317 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.78
RPUSD4-201ENST00000298317 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
RPUSD4-201ENST00000298317 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
RPUSD4-201ENST00000298317 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
RPUSD4-201ENST00000298317 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
RPUSD4-201ENST00000298317 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
RPUSD4-201ENST00000298317 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
RPUSD4-201ENST00000298317 FSIP2Q5CZC0 6907 aa3.78□□□□□ -1.8
RPUSD4-201ENST00000298317 SPRR2FQ96RM1 72 aa3.74□□□□□ -1.81
RPUSD4-201ENST00000298317 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
RPUSD4-201ENST00000298317 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
RPUSD4-201ENST00000298317 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
RPUSD4-201ENST00000298317 LCE1DQ5T752 114 aa3.52□□□□□ -1.85
RPUSD4-201ENST00000298317 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
RPUSD4-201ENST00000298317 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
RPUSD4-201ENST00000298317 MDN1Q9NU22 5596 aa3.46□□□□□ -1.85
RPUSD4-201ENST00000298317 MT3P25713 68 aa3.37□□□□□ -1.87
RPUSD4-201ENST00000298317 SPRR2AP35326 72 aa3.35□□□□□ -1.87
RPUSD4-201ENST00000298317 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
RPUSD4-201ENST00000298317 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
RPUSD4-201ENST00000298317 SPRR2EP22531 72 aa3.29□□□□□ -1.88
RPUSD4-201ENST00000298317 SPRR2BP35325 72 aa3.28□□□□□ -1.88
RPUSD4-201ENST00000298317 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
RPUSD4-201ENST00000298317 SPRR2DP22532 72 aa3.13□□□□□ -1.91
RPUSD4-201ENST00000298317 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
RPUSD4-201ENST00000298317 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
RPUSD4-201ENST00000298317 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.93□□□□□ -1.94
RPUSD4-201ENST00000298317 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
RPUSD4-201ENST00000298317 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.94
RPUSD4-201ENST00000298317 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
RPUSD4-201ENST00000298317 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
RPUSD4-201ENST00000298317 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
RPUSD4-201ENST00000298317 MT4P47944 62 aa2.76□□□□□ -1.97
RPUSD4-201ENST00000298317 KRTAP5-1Q6L8H4 278 aa2.75□□□□□ -1.97
RPUSD4-201ENST00000298317 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
RPUSD4-201ENST00000298317 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
RPUSD4-201ENST00000298317 LCE4AQ5TA78 99 aa2.69□□□□□ -1.98
RPUSD4-201ENST00000298317 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
RPUSD4-201ENST00000298317 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
RPUSD4-201ENST00000298317 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
RPUSD4-201ENST00000298317 NEBP20929 6669 aa2.6□□□□□ -1.99
RPUSD4-201ENST00000298317 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
RPUSD4-201ENST00000298317 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
RPUSD4-201ENST00000298317 LCE1CQ5T751 118 aa2.53□□□□□ -2
RPUSD4-201ENST00000298317 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
RPUSD4-201ENST00000298317 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
RPUSD4-201ENST00000298317 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
RPUSD4-201ENST00000298317 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
RPUSD4-201ENST00000298317 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
RPUSD4-201ENST00000298317 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
RPUSD4-201ENST00000298317 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
RPUSD4-201ENST00000298317 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
RPUSD4-201ENST00000298317 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
RPUSD4-201ENST00000298317 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
RPUSD4-201ENST00000298317 AHNAK2Q8IVF2 5795 aa1.98□□□□□ -2.09
RPUSD4-201ENST00000298317 AHNAKQ09666 5890 aaKnown RBP1.91□□□□□ -2.1
RPUSD4-201ENST00000298317 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
RPUSD4-201ENST00000298317 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 160.1 ms