RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 KRTAP5-8O75690 187 aa5.72□□□□□ -1.49
LRPAP1-201ENST00000296325 CHKB-CPT1BH3BT56 60 aa5.69□□□□□ -1.5
LRPAP1-201ENST00000296325 COX7CP15954 63 aa5.68□□□□□ -1.5
LRPAP1-201ENST00000296325 SPANXA2-OT1Q8N9U9 137 aa5.65□□□□□ -1.5
LRPAP1-201ENST00000296325 KRTAP5-2Q701N4 177 aa5.63□□□□□ -1.51
LRPAP1-201ENST00000296325 ANAPC13Q9BS18 74 aa5.63□□□□□ -1.51
LRPAP1-201ENST00000296325 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.51
LRPAP1-201ENST00000296325 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
LRPAP1-201ENST00000296325 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
LRPAP1-201ENST00000296325 H7BZZ5 65 aa5.53□□□□□ -1.52
LRPAP1-201ENST00000296325 COA5Q86WW8 74 aa5.51□□□□□ -1.53
LRPAP1-201ENST00000296325 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
LRPAP1-201ENST00000296325 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
LRPAP1-201ENST00000296325 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
LRPAP1-201ENST00000296325 SPATA8Q6RVD6 105 aa5.48□□□□□ -1.53
LRPAP1-201ENST00000296325 KRTAP9-9Q9BYP9 154 aa5.48□□□□□ -1.53
LRPAP1-201ENST00000296325 TNP1P09430 55 aa5.45□□□□□ -1.54
LRPAP1-201ENST00000296325 SEC61GP60059 68 aa5.38□□□□□ -1.55
LRPAP1-201ENST00000296325 SERP1Q9Y6X1 66 aa5.36□□□□□ -1.55
LRPAP1-201ENST00000296325 ATP5EP56381 51 aaPredicted RBP5.33□□□□□ -1.56
LRPAP1-201ENST00000296325 A0A1B0GU33 70 aa5.31□□□□□ -1.56
LRPAP1-201ENST00000296325 KRTAP6-1Q3LI64 71 aa5.3□□□□□ -1.56
LRPAP1-201ENST00000296325 TMEM258P61165 79 aa5.28□□□□□ -1.56
LRPAP1-201ENST00000296325 MT1AP04731 61 aa5.27□□□□□ -1.57
LRPAP1-201ENST00000296325 A0A1B0GU69 56 aa5.26□□□□□ -1.57
LRPAP1-201ENST00000296325 A8MU10 97 aa5.19□□□□□ -1.58
LRPAP1-201ENST00000296325 KRTAP6-2Q3LI66 62 aa5.19□□□□□ -1.58
LRPAP1-201ENST00000296325 KRTAP5-1Q6L8H4 278 aa5.19□□□□□ -1.58
LRPAP1-201ENST00000296325 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
LRPAP1-201ENST00000296325 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
LRPAP1-201ENST00000296325 PRR15LQ9BU68 103 aa5.16□□□□□ -1.58
LRPAP1-201ENST00000296325 SMIM26A0A096LP01 95 aa5.13□□□□□ -1.59
LRPAP1-201ENST00000296325 LINC01558Q9Y6Z2 57 aa5.12□□□□□ -1.59
LRPAP1-201ENST00000296325 PCP4P48539 62 aa5.06□□□□□ -1.6
LRPAP1-201ENST00000296325 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
LRPAP1-201ENST00000296325 UQCR11O14957 56 aa4.98□□□□□ -1.61
LRPAP1-201ENST00000296325 V9GYY9 64 aa4.96□□□□□ -1.62
LRPAP1-201ENST00000296325 PSPHP1O15172 72 aa4.94□□□□□ -1.62
LRPAP1-201ENST00000296325 KRTAP25-1Q3LHN0 102 aa4.94□□□□□ -1.62
LRPAP1-201ENST00000296325 Q1T7F1 81 aa4.91□□□□□ -1.62
LRPAP1-201ENST00000296325 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
LRPAP1-201ENST00000296325 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
LRPAP1-201ENST00000296325 SVIPQ8NHG7 77 aa4.87□□□□□ -1.63
LRPAP1-201ENST00000296325 RPS28P62857 69 aaKnown RBP4.84□□□□□ -1.63
LRPAP1-201ENST00000296325 MT3P25713 68 aa4.82□□□□□ -1.64
LRPAP1-201ENST00000296325 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
LRPAP1-201ENST00000296325 A6NED7 52 aa4.79□□□□□ -1.64
LRPAP1-201ENST00000296325 K7ERS5 55 aa4.79□□□□□ -1.64
LRPAP1-201ENST00000296325 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
LRPAP1-201ENST00000296325 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
LRPAP1-201ENST00000296325 CDC42SE1Q9NRR8 79 aa4.57□□□□□ -1.68
LRPAP1-201ENST00000296325 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
LRPAP1-201ENST00000296325 ROMO1P60602 79 aa4.47□□□□□ -1.69
LRPAP1-201ENST00000296325 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
LRPAP1-201ENST00000296325 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
LRPAP1-201ENST00000296325 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
LRPAP1-201ENST00000296325 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
LRPAP1-201ENST00000296325 KRTAP5-11Q6L8G4 156 aa4.17□□□□□ -1.74
LRPAP1-201ENST00000296325 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
LRPAP1-201ENST00000296325 H3BS24 57 aa4.05□□□□□ -1.76
LRPAP1-201ENST00000296325 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
LRPAP1-201ENST00000296325 PHGR1C9JFL3 82 aa4.02□□□□□ -1.77
LRPAP1-201ENST00000296325 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
LRPAP1-201ENST00000296325 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
LRPAP1-201ENST00000296325 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
LRPAP1-201ENST00000296325 KTN1-AS1Q86SY8 53 aa3.73□□□□□ -1.81
LRPAP1-201ENST00000296325 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
LRPAP1-201ENST00000296325 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
LRPAP1-201ENST00000296325 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
LRPAP1-201ENST00000296325 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
LRPAP1-201ENST00000296325 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
LRPAP1-201ENST00000296325 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
LRPAP1-201ENST00000296325 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
LRPAP1-201ENST00000296325 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
LRPAP1-201ENST00000296325 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
LRPAP1-201ENST00000296325 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
LRPAP1-201ENST00000296325 PRM1P04553 51 aa2.31□□□□□ -2.04
LRPAP1-201ENST00000296325 INE1O15225 51 aa2.28□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms