RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 SPINT4Q6UDR6 99 aa5.59□□□□□ -1.51
TMEM41A-201ENST00000296254 SPATA8Q6RVD6 105 aa5.58□□□□□ -1.52
TMEM41A-201ENST00000296254 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
TMEM41A-201ENST00000296254 KRTAP4-3Q9BYR4 195 aa5.58□□□□□ -1.52
TMEM41A-201ENST00000296254 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
TMEM41A-201ENST00000296254 SEC61GP60059 68 aa5.53□□□□□ -1.52
TMEM41A-201ENST00000296254 COA5Q86WW8 74 aa5.53□□□□□ -1.52
TMEM41A-201ENST00000296254 ANAPC13Q9BS18 74 aa5.53□□□□□ -1.52
TMEM41A-201ENST00000296254 SERP1Q9Y6X1 66 aa5.53□□□□□ -1.52
TMEM41A-201ENST00000296254 COX7CP15954 63 aa5.52□□□□□ -1.53
TMEM41A-201ENST00000296254 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
TMEM41A-201ENST00000296254 KRTAP5-7Q6L8G8 165 aa5.49□□□□□ -1.53
TMEM41A-201ENST00000296254 A0A1B0GU33 70 aa5.48□□□□□ -1.53
TMEM41A-201ENST00000296254 LCE3AQ5TA76 89 aa5.48□□□□□ -1.53
TMEM41A-201ENST00000296254 H7BZZ5 65 aa5.38□□□□□ -1.55
TMEM41A-201ENST00000296254 TNP1P09430 55 aa5.37□□□□□ -1.55
TMEM41A-201ENST00000296254 CCDC179H3BU77 68 aa5.36□□□□□ -1.55
TMEM41A-201ENST00000296254 KRTAP20-2Q3LI61 65 aa5.36□□□□□ -1.55
TMEM41A-201ENST00000296254 SMIM26A0A096LP01 95 aa5.33□□□□□ -1.56
TMEM41A-201ENST00000296254 A8MU10 97 aa5.31□□□□□ -1.56
TMEM41A-201ENST00000296254 KRTAP5-5Q701N2 237 aaPredicted RBP5.3□□□□□ -1.56
TMEM41A-201ENST00000296254 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
TMEM41A-201ENST00000296254 TMEM258P61165 79 aa5.27□□□□□ -1.57
TMEM41A-201ENST00000296254 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
TMEM41A-201ENST00000296254 A0A1B0GU69 56 aa5.24□□□□□ -1.57
TMEM41A-201ENST00000296254 ATP5EP56381 51 aaPredicted RBP5.23□□□□□ -1.57
TMEM41A-201ENST00000296254 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
TMEM41A-201ENST00000296254 RPS28P62857 69 aaKnown RBP5.21□□□□□ -1.58
TMEM41A-201ENST00000296254 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
TMEM41A-201ENST00000296254 PRR15LQ9BU68 103 aa5.07□□□□□ -1.6
TMEM41A-201ENST00000296254 PRAC1Q96KF2 57 aa5□□□□□ -1.61
TMEM41A-201ENST00000296254 LINC01558Q9Y6Z2 57 aa5□□□□□ -1.61
TMEM41A-201ENST00000296254 V9GYY9 64 aa4.92□□□□□ -1.62
TMEM41A-201ENST00000296254 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
TMEM41A-201ENST00000296254 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
TMEM41A-201ENST00000296254 Q1T7F1 81 aa4.89□□□□□ -1.63
TMEM41A-201ENST00000296254 UQCR11O14957 56 aa4.88□□□□□ -1.63
TMEM41A-201ENST00000296254 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
TMEM41A-201ENST00000296254 MUC5BQ9HC84 5762 aaPredicted RBP4.85□□□□□ -1.63
TMEM41A-201ENST00000296254 MUC5ACP98088 5654 aa4.84□□□□□ -1.63
TMEM41A-201ENST00000296254 KRTAP5-8O75690 187 aa4.81□□□□□ -1.64
TMEM41A-201ENST00000296254 MT1AP04731 61 aa4.81□□□□□ -1.64
TMEM41A-201ENST00000296254 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
TMEM41A-201ENST00000296254 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
TMEM41A-201ENST00000296254 MIR22HGQ0VDD5 57 aa4.78□□□□□ -1.64
TMEM41A-201ENST00000296254 PSPHP1O15172 72 aa4.76□□□□□ -1.65
TMEM41A-201ENST00000296254 MT3P25713 68 aa4.75□□□□□ -1.65
TMEM41A-201ENST00000296254 K7ERS5 55 aa4.71□□□□□ -1.66
TMEM41A-201ENST00000296254 NDUFAF8A1L188 74 aa4.7□□□□□ -1.66
TMEM41A-201ENST00000296254 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
TMEM41A-201ENST00000296254 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
TMEM41A-201ENST00000296254 A6NED7 52 aa4.64□□□□□ -1.67
TMEM41A-201ENST00000296254 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
TMEM41A-201ENST00000296254 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
TMEM41A-201ENST00000296254 CDC42SE1Q9NRR8 79 aa4.56□□□□□ -1.68
TMEM41A-201ENST00000296254 BRK1Q8WUW1 75 aa4.54□□□□□ -1.68
TMEM41A-201ENST00000296254 KRTAP5-1Q6L8H4 278 aa4.46□□□□□ -1.7
TMEM41A-201ENST00000296254 ROMO1P60602 79 aa4.37□□□□□ -1.71
TMEM41A-201ENST00000296254 PMAIP1Q13794 54 aa4.35□□□□□ -1.71
TMEM41A-201ENST00000296254 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
TMEM41A-201ENST00000296254 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
TMEM41A-201ENST00000296254 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
TMEM41A-201ENST00000296254 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.13□□□□□ -1.75
TMEM41A-201ENST00000296254 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
TMEM41A-201ENST00000296254 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
TMEM41A-201ENST00000296254 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
TMEM41A-201ENST00000296254 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
TMEM41A-201ENST00000296254 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
TMEM41A-201ENST00000296254 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
TMEM41A-201ENST00000296254 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
TMEM41A-201ENST00000296254 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
TMEM41A-201ENST00000296254 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
TMEM41A-201ENST00000296254 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
TMEM41A-201ENST00000296254 INE1O15225 51 aa2.81□□□□□ -1.96
TMEM41A-201ENST00000296254 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
TMEM41A-201ENST00000296254 PRM1P04553 51 aa2.23□□□□□ -2.05
TMEM41A-201ENST00000296254 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms