RNA–Protein interactions for RNA: ENST00000296145.5

TDGF1-201, Transcript of teratocarcinoma-derived growth factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TDGF1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDGF1-201ENST00000296145 KRTAP10-5P60370 271 aa3.65□□□□□ -1.83
TDGF1-201ENST00000296145 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
TDGF1-201ENST00000296145 MT1XP80297 61 aa3.64□□□□□ -1.83
TDGF1-201ENST00000296145 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
TDGF1-201ENST00000296145 KRTAP8-1Q8IUC2 63 aa3.63□□□□□ -1.83
TDGF1-201ENST00000296145 LCE1DQ5T752 114 aa3.62□□□□□ -1.83
TDGF1-201ENST00000296145 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
TDGF1-201ENST00000296145 USH2AO75445 5202 aa3.55□□□□□ -1.84
TDGF1-201ENST00000296145 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
TDGF1-201ENST00000296145 KRTAP12-3P60328 96 aa3.53□□□□□ -1.84
TDGF1-201ENST00000296145 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
TDGF1-201ENST00000296145 KRTAP4-11Q9BYQ6 195 aa3.47□□□□□ -1.85
TDGF1-201ENST00000296145 KMT2DO14686 5537 aa3.46□□□□□ -1.86
TDGF1-201ENST00000296145 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
TDGF1-201ENST00000296145 KRTAP4-9Q9BYQ8 210 aa3.4□□□□□ -1.86
TDGF1-201ENST00000296145 FSIP2Q5CZC0 6907 aa3.39□□□□□ -1.87
TDGF1-201ENST00000296145 KRTAP19-5Q3LI72 72 aa3.38□□□□□ -1.87
TDGF1-201ENST00000296145 SSPOA2VEC9 5147 aa3.26□□□□□ -1.89
TDGF1-201ENST00000296145 KRTAP19-7Q3SYF9 63 aa3.25□□□□□ -1.89
TDGF1-201ENST00000296145 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
TDGF1-201ENST00000296145 CRCT1Q9UGL9 99 aa3.16□□□□□ -1.9
TDGF1-201ENST00000296145 MT1EP04732 61 aa3.15□□□□□ -1.91
TDGF1-201ENST00000296145 MT1LQ93083 61 aa3.15□□□□□ -1.91
TDGF1-201ENST00000296145 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
TDGF1-201ENST00000296145 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
TDGF1-201ENST00000296145 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
TDGF1-201ENST00000296145 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
TDGF1-201ENST00000296145 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
TDGF1-201ENST00000296145 FCGBPQ9Y6R7 5405 aaPredicted RBP3.06□□□□□ -1.92
TDGF1-201ENST00000296145 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
TDGF1-201ENST00000296145 DSTQ03001 7570 aaKnown RBP2.97□□□□□ -1.93
TDGF1-201ENST00000296145 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
TDGF1-201ENST00000296145 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
TDGF1-201ENST00000296145 MT1MQ8N339 61 aa2.94□□□□□ -1.94
TDGF1-201ENST00000296145 MT1GP13640 62 aa2.93□□□□□ -1.94
TDGF1-201ENST00000296145 SYNE2Q8WXH0 6885 aaKnown RBP2.9□□□□□ -1.94
TDGF1-201ENST00000296145 MACF1Q9UPN3 7388 aaKnown RBP2.9□□□□□ -1.94
TDGF1-201ENST00000296145 SPRR2FQ96RM1 72 aa2.82□□□□□ -1.96
TDGF1-201ENST00000296145 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
TDGF1-201ENST00000296145 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
TDGF1-201ENST00000296145 KRTAP5-9P26371 169 aa2.73□□□□□ -1.97
TDGF1-201ENST00000296145 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
TDGF1-201ENST00000296145 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
TDGF1-201ENST00000296145 MT1AP04731 61 aa2.65□□□□□ -1.99
TDGF1-201ENST00000296145 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
TDGF1-201ENST00000296145 PRM1P04553 51 aa2.62□□□□□ -1.99
TDGF1-201ENST00000296145 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
TDGF1-201ENST00000296145 SPRR2EP22531 72 aa2.61□□□□□ -1.99
TDGF1-201ENST00000296145 SPRR2BP35325 72 aa2.61□□□□□ -1.99
TDGF1-201ENST00000296145 SPRR2AP35326 72 aa2.61□□□□□ -1.99
TDGF1-201ENST00000296145 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
TDGF1-201ENST00000296145 NEBP20929 6669 aa2.57□□□□□ -2
TDGF1-201ENST00000296145 SPRR2DP22532 72 aa2.53□□□□□ -2
TDGF1-201ENST00000296145 KRTAP20-1Q3LI63 56 aa2.53□□□□□ -2
TDGF1-201ENST00000296145 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
TDGF1-201ENST00000296145 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
TDGF1-201ENST00000296145 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
TDGF1-201ENST00000296145 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
TDGF1-201ENST00000296145 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
TDGF1-201ENST00000296145 KRTAP5-4Q6L8H1 288 aa2.3□□□□□ -2.04
TDGF1-201ENST00000296145 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
TDGF1-201ENST00000296145 MT4P47944 62 aa2.21□□□□□ -2.06
TDGF1-201ENST00000296145 KRTAP5-1Q6L8H4 278 aa2.2□□□□□ -2.06
TDGF1-201ENST00000296145 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
TDGF1-201ENST00000296145 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
TDGF1-201ENST00000296145 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
TDGF1-201ENST00000296145 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
TDGF1-201ENST00000296145 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
TDGF1-201ENST00000296145 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
TDGF1-201ENST00000296145 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
TDGF1-201ENST00000296145 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
TDGF1-201ENST00000296145 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
TDGF1-201ENST00000296145 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
TDGF1-201ENST00000296145 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
TDGF1-201ENST00000296145 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
TDGF1-201ENST00000296145 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
TDGF1-201ENST00000296145 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 49.6 ms