RNA–Protein interactions for RNA: ENST00000295317.3

RNF149-201, Transcript of ring finger protein 149, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF149, Length 2,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-201ENST00000295317 DSTQ03001 7570 aaKnown RBP7.33□□□□□ -1.24
RNF149-201ENST00000295317 SYNE2Q8WXH0 6885 aaKnown RBP7.24□□□□□ -1.25
RNF149-201ENST00000295317 LOC100996750A0A140TA64 210 aa7.23□□□□□ -1.25
RNF149-201ENST00000295317 SPRR2FQ96RM1 72 aa7.19□□□□□ -1.26
RNF149-201ENST00000295317 KRTAP19-3Q7Z4W3 81 aa7.17□□□□□ -1.26
RNF149-201ENST00000295317 KRTAP9-2Q9BYQ4 174 aa7.16□□□□□ -1.26
RNF149-201ENST00000295317 MT1MQ8N339 61 aa7.14□□□□□ -1.27
RNF149-201ENST00000295317 MT1GP13640 62 aa7.13□□□□□ -1.27
RNF149-201ENST00000295317 INE1O15225 51 aa7.11□□□□□ -1.27
RNF149-201ENST00000295317 KRTAP19-4Q3LI73 84 aa7.1□□□□□ -1.27
RNF149-201ENST00000295317 MDN1Q9NU22 5596 aa7.08□□□□□ -1.28
RNF149-201ENST00000295317 CRCT1Q9UGL9 99 aa7.07□□□□□ -1.28
RNF149-201ENST00000295317 KRTAP2-3P0C7H8 128 aa7.01□□□□□ -1.29
RNF149-201ENST00000295317 KRTAP2-4Q9BYR9 128 aa7.01□□□□□ -1.29
RNF149-201ENST00000295317 KRTAP2-1Q9BYU5 128 aa7.01□□□□□ -1.29
RNF149-201ENST00000295317 LCE5AQ5TCM9 118 aa6.98□□□□□ -1.29
RNF149-201ENST00000295317 LCE1AQ5T7P2 110 aa6.71□□□□□ -1.33
RNF149-201ENST00000295317 KRTAP5-9P26371 169 aa6.67□□□□□ -1.34
RNF149-201ENST00000295317 SYNE1Q8NF91 8797 aaKnown RBP6.63□□□□□ -1.35
RNF149-201ENST00000295317 SPRR2EP22531 72 aa6.61□□□□□ -1.35
RNF149-201ENST00000295317 SPRR2BP35325 72 aa6.61□□□□□ -1.35
RNF149-201ENST00000295317 SPRR2AP35326 72 aa6.61□□□□□ -1.35
RNF149-201ENST00000295317 LCE3BQ5TA77 95 aa6.51□□□□□ -1.37
RNF149-201ENST00000295317 KRTAP6-1Q3LI64 71 aa6.47□□□□□ -1.37
RNF149-201ENST00000295317 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.41□□□□□ -1.38
RNF149-201ENST00000295317 KRTAP4-9Q9BYQ8 210 aa6.4□□□□□ -1.38
RNF149-201ENST00000295317 KRTAP5-5Q701N2 237 aaPredicted RBP6.32□□□□□ -1.4
RNF149-201ENST00000295317 SPRR2DP22532 72 aa6.31□□□□□ -1.4
RNF149-201ENST00000295317 MT1AP04731 61 aa6.3□□□□□ -1.4
RNF149-201ENST00000295317 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
RNF149-201ENST00000295317 KRTAP6-3Q3LI67 103 aa6.26□□□□□ -1.41
RNF149-201ENST00000295317 KRTAP12-4P60329 112 aa6.21□□□□□ -1.41
RNF149-201ENST00000295317 OBSCNQ5VST9 7968 aa6.2□□□□□ -1.42
RNF149-201ENST00000295317 NEBP20929 6669 aa5.98□□□□□ -1.45
RNF149-201ENST00000295317 KRTAP9-4Q9BYQ2 154 aa5.97□□□□□ -1.45
RNF149-201ENST00000295317 LCE3DQ9BYE3 92 aa5.93□□□□□ -1.46
RNF149-201ENST00000295317 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
RNF149-201ENST00000295317 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
RNF149-201ENST00000295317 LCE3EQ5T5B0 92 aa5.79□□□□□ -1.48
RNF149-201ENST00000295317 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
RNF149-201ENST00000295317 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
RNF149-201ENST00000295317 MT3P25713 68 aa5.67□□□□□ -1.5
RNF149-201ENST00000295317 MT4P47944 62 aa5.67□□□□□ -1.5
RNF149-201ENST00000295317 HMCN1Q96RW7 5635 aa5.49□□□□□ -1.53
RNF149-201ENST00000295317 PRM1P04553 51 aa5.47□□□□□ -1.53
RNF149-201ENST00000295317 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
RNF149-201ENST00000295317 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
RNF149-201ENST00000295317 LCE1DQ5T752 114 aa5.35□□□□□ -1.55
RNF149-201ENST00000295317 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
RNF149-201ENST00000295317 KRTAP5-2Q701N4 177 aa5.25□□□□□ -1.57
RNF149-201ENST00000295317 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
RNF149-201ENST00000295317 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.58
RNF149-201ENST00000295317 MUC5ACP98088 5654 aa4.9□□□□□ -1.63
RNF149-201ENST00000295317 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
RNF149-201ENST00000295317 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
RNF149-201ENST00000295317 KRTAP5-1Q6L8H4 278 aa4.57□□□□□ -1.68
RNF149-201ENST00000295317 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
RNF149-201ENST00000295317 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
RNF149-201ENST00000295317 KRTAP5-10Q6L8G5 202 aa4.47□□□□□ -1.69
RNF149-201ENST00000295317 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
RNF149-201ENST00000295317 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
RNF149-201ENST00000295317 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
RNF149-201ENST00000295317 KRTAP21-2Q3LI59 83 aa4.16□□□□□ -1.74
RNF149-201ENST00000295317 MUC5BQ9HC84 5762 aaPredicted RBP4.13□□□□□ -1.75
RNF149-201ENST00000295317 KRTAP5-7Q6L8G8 165 aa4.13□□□□□ -1.75
RNF149-201ENST00000295317 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
RNF149-201ENST00000295317 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.78
RNF149-201ENST00000295317 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
RNF149-201ENST00000295317 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
RNF149-201ENST00000295317 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
RNF149-201ENST00000295317 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
RNF149-201ENST00000295317 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
RNF149-201ENST00000295317 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
RNF149-201ENST00000295317 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
RNF149-201ENST00000295317 KRTAP21-1Q3LI58 79 aa3.3□□□□□ -1.88
RNF149-201ENST00000295317 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
RNF149-201ENST00000295317 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 102 ms