RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 FCGBPQ9Y6R7 5405 aaPredicted RBP3.37□□□□□ -1.87
PDPN-201ENST00000294489 KMT2DO14686 5537 aa3.37□□□□□ -1.87
PDPN-201ENST00000294489 FSIP2Q5CZC0 6907 aa3.33□□□□□ -1.88
PDPN-201ENST00000294489 CRCT1Q9UGL9 99 aa3.33□□□□□ -1.88
PDPN-201ENST00000294489 MT1EP04732 61 aa3.3□□□□□ -1.88
PDPN-201ENST00000294489 KRTAP19-4Q3LI73 84 aa3.28□□□□□ -1.88
PDPN-201ENST00000294489 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
PDPN-201ENST00000294489 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
PDPN-201ENST00000294489 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
PDPN-201ENST00000294489 MT1LQ93083 61 aa3.24□□□□□ -1.89
PDPN-201ENST00000294489 KRTAP9-7A8MTY7 169 aa3.23□□□□□ -1.89
PDPN-201ENST00000294489 KRTAP4-7Q9BYR0 210 aa3.19□□□□□ -1.9
PDPN-201ENST00000294489 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
PDPN-201ENST00000294489 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.9
PDPN-201ENST00000294489 KRTAP19-3Q7Z4W3 81 aa3.15□□□□□ -1.91
PDPN-201ENST00000294489 MT1GP13640 62 aa3.13□□□□□ -1.91
PDPN-201ENST00000294489 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
PDPN-201ENST00000294489 KRTAP4-9Q9BYQ8 210 aa3.13□□□□□ -1.91
PDPN-201ENST00000294489 LCE5AQ5TCM9 118 aa3.11□□□□□ -1.91
PDPN-201ENST00000294489 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
PDPN-201ENST00000294489 MT1MQ8N339 61 aa3.1□□□□□ -1.91
PDPN-201ENST00000294489 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
PDPN-201ENST00000294489 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
PDPN-201ENST00000294489 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
PDPN-201ENST00000294489 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
PDPN-201ENST00000294489 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
PDPN-201ENST00000294489 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
PDPN-201ENST00000294489 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
PDPN-201ENST00000294489 SYNE2Q8WXH0 6885 aaKnown RBP3.01□□□□□ -1.93
PDPN-201ENST00000294489 SPRR2EP22531 72 aa2.97□□□□□ -1.93
PDPN-201ENST00000294489 SPRR2BP35325 72 aa2.97□□□□□ -1.93
PDPN-201ENST00000294489 SPRR2AP35326 72 aa2.97□□□□□ -1.93
PDPN-201ENST00000294489 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
PDPN-201ENST00000294489 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
PDPN-201ENST00000294489 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
PDPN-201ENST00000294489 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
PDPN-201ENST00000294489 MDN1Q9NU22 5596 aa2.91□□□□□ -1.94
PDPN-201ENST00000294489 SPRR2DP22532 72 aa2.86□□□□□ -1.95
PDPN-201ENST00000294489 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
PDPN-201ENST00000294489 NEBP20929 6669 aa2.79□□□□□ -1.96
PDPN-201ENST00000294489 MT1AP04731 61 aa2.76□□□□□ -1.97
PDPN-201ENST00000294489 KRTAP2-2Q9BYT5 123 aa2.74□□□□□ -1.97
PDPN-201ENST00000294489 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
PDPN-201ENST00000294489 KRTAP5-3Q6L8H2 238 aa2.71□□□□□ -1.98
PDPN-201ENST00000294489 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
PDPN-201ENST00000294489 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
PDPN-201ENST00000294489 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
PDPN-201ENST00000294489 KRTAP12-4P60329 112 aa2.56□□□□□ -2
PDPN-201ENST00000294489 LCE1FQ5T754 118 aa2.55□□□□□ -2
PDPN-201ENST00000294489 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
PDPN-201ENST00000294489 MT3P25713 68 aa2.48□□□□□ -2.01
PDPN-201ENST00000294489 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
PDPN-201ENST00000294489 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.01
PDPN-201ENST00000294489 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
PDPN-201ENST00000294489 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
PDPN-201ENST00000294489 MT4P47944 62 aa2.45□□□□□ -2.02
PDPN-201ENST00000294489 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
PDPN-201ENST00000294489 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
PDPN-201ENST00000294489 PRM1P04553 51 aa2.28□□□□□ -2.04
PDPN-201ENST00000294489 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
PDPN-201ENST00000294489 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
PDPN-201ENST00000294489 KRTAP5-1Q6L8H4 278 aa2.09□□□□□ -2.07
PDPN-201ENST00000294489 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.08
PDPN-201ENST00000294489 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
PDPN-201ENST00000294489 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
PDPN-201ENST00000294489 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
PDPN-201ENST00000294489 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
PDPN-201ENST00000294489 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
PDPN-201ENST00000294489 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
PDPN-201ENST00000294489 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
PDPN-201ENST00000294489 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.1
PDPN-201ENST00000294489 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
PDPN-201ENST00000294489 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
PDPN-201ENST00000294489 KRTAP4-4Q9BYR3 166 aa1.72□□□□□ -2.13
PDPN-201ENST00000294489 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
PDPN-201ENST00000294489 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
PDPN-201ENST00000294489 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 43.4 ms