RNA–Protein interactions for RNA: ENST00000293861.7

SNRNP25-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNRNP25, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-201ENST00000293861 SYNE2Q8WXH0 6885 aaKnown RBP7.55□□□□□ -1.2
SNRNP25-201ENST00000293861 KRTAP4-7Q9BYR0 210 aa7.4□□□□□ -1.23
SNRNP25-201ENST00000293861 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
SNRNP25-201ENST00000293861 KRTAP19-3Q7Z4W3 81 aa7.36□□□□□ -1.23
SNRNP25-201ENST00000293861 SPRR2FQ96RM1 72 aa7.36□□□□□ -1.23
SNRNP25-201ENST00000293861 KRTAP9-6A8MVA2 160 aa7.33□□□□□ -1.24
SNRNP25-201ENST00000293861 MT1GP13640 62 aa7.32□□□□□ -1.24
SNRNP25-201ENST00000293861 MT1MQ8N339 61 aa7.24□□□□□ -1.25
SNRNP25-201ENST00000293861 MUC12Q9UKN1 5478 aa7.23□□□□□ -1.25
SNRNP25-201ENST00000293861 KRTAP5-9P26371 169 aa7.21□□□□□ -1.25
SNRNP25-201ENST00000293861 LCE5AQ5TCM9 118 aa7.19□□□□□ -1.26
SNRNP25-201ENST00000293861 A0A0A0MQY5 61 aa7.16□□□□□ -1.26
SNRNP25-201ENST00000293861 MDN1Q9NU22 5596 aa7.11□□□□□ -1.27
SNRNP25-201ENST00000293861 KRTAP6-3Q3LI67 103 aa7.11□□□□□ -1.27
SNRNP25-201ENST00000293861 KRTAP4-3Q9BYR4 195 aa7.09□□□□□ -1.27
SNRNP25-201ENST00000293861 KRTAP9-7A8MTY7 169 aa7.04□□□□□ -1.28
SNRNP25-201ENST00000293861 LCE1AQ5T7P2 110 aa7.01□□□□□ -1.29
SNRNP25-201ENST00000293861 KRTAP2-3P0C7H8 128 aa6.94□□□□□ -1.3
SNRNP25-201ENST00000293861 KRTAP2-4Q9BYR9 128 aa6.94□□□□□ -1.3
SNRNP25-201ENST00000293861 KRTAP2-1Q9BYU5 128 aa6.94□□□□□ -1.3
SNRNP25-201ENST00000293861 LOC100996750A0A140TA64 210 aa6.93□□□□□ -1.3
SNRNP25-201ENST00000293861 SPRR2EP22531 72 aa6.91□□□□□ -1.3
SNRNP25-201ENST00000293861 SPRR2BP35325 72 aa6.91□□□□□ -1.3
SNRNP25-201ENST00000293861 SPRR2AP35326 72 aa6.91□□□□□ -1.3
SNRNP25-201ENST00000293861 NEBP20929 6669 aa6.85□□□□□ -1.31
SNRNP25-201ENST00000293861 DSTQ03001 7570 aaKnown RBP6.69□□□□□ -1.34
SNRNP25-201ENST00000293861 INE1O15225 51 aa6.67□□□□□ -1.34
SNRNP25-201ENST00000293861 SPRR2DP22532 72 aa6.66□□□□□ -1.34
SNRNP25-201ENST00000293861 KRTAP5-5Q701N2 237 aaPredicted RBP6.51□□□□□ -1.37
SNRNP25-201ENST00000293861 MT1AP04731 61 aa6.46□□□□□ -1.38
SNRNP25-201ENST00000293861 KRTAP6-1Q3LI64 71 aa6.4□□□□□ -1.39
SNRNP25-201ENST00000293861 LCE3BQ5TA77 95 aa6.37□□□□□ -1.39
SNRNP25-201ENST00000293861 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.41
SNRNP25-201ENST00000293861 KRTAP2-2Q9BYT5 123 aa6.11□□□□□ -1.43
SNRNP25-201ENST00000293861 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
SNRNP25-201ENST00000293861 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
SNRNP25-201ENST00000293861 KRTAP5-4Q6L8H1 288 aa6.09□□□□□ -1.43
SNRNP25-201ENST00000293861 KRTAP4-9Q9BYQ8 210 aa5.99□□□□□ -1.45
SNRNP25-201ENST00000293861 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
SNRNP25-201ENST00000293861 LCE4AQ5TA78 99 aa5.92□□□□□ -1.46
SNRNP25-201ENST00000293861 LCE3DQ9BYE3 92 aa5.84□□□□□ -1.47
SNRNP25-201ENST00000293861 MT3P25713 68 aa5.84□□□□□ -1.48
SNRNP25-201ENST00000293861 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.48
SNRNP25-201ENST00000293861 MT4P47944 62 aa5.78□□□□□ -1.48
SNRNP25-201ENST00000293861 KRTAP4-6Q9BYQ5 205 aa5.75□□□□□ -1.49
SNRNP25-201ENST00000293861 LCE3EQ5T5B0 92 aa5.73□□□□□ -1.49
SNRNP25-201ENST00000293861 HMCN1Q96RW7 5635 aa5.71□□□□□ -1.49
SNRNP25-201ENST00000293861 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
SNRNP25-201ENST00000293861 KRTAP20-2Q3LI61 65 aa5.68□□□□□ -1.5
SNRNP25-201ENST00000293861 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
SNRNP25-201ENST00000293861 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.53
SNRNP25-201ENST00000293861 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
SNRNP25-201ENST00000293861 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.58
SNRNP25-201ENST00000293861 PRM1P04553 51 aa5.15□□□□□ -1.59
SNRNP25-201ENST00000293861 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
SNRNP25-201ENST00000293861 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
SNRNP25-201ENST00000293861 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
SNRNP25-201ENST00000293861 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
SNRNP25-201ENST00000293861 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
SNRNP25-201ENST00000293861 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
SNRNP25-201ENST00000293861 KRTAP5-8O75690 187 aa4.7□□□□□ -1.66
SNRNP25-201ENST00000293861 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
SNRNP25-201ENST00000293861 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
SNRNP25-201ENST00000293861 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
SNRNP25-201ENST00000293861 KRTAP5-7Q6L8G8 165 aa4.64□□□□□ -1.67
SNRNP25-201ENST00000293861 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.7
SNRNP25-201ENST00000293861 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
SNRNP25-201ENST00000293861 KRTAP21-2Q3LI59 83 aa4.19□□□□□ -1.74
SNRNP25-201ENST00000293861 MUC5BQ9HC84 5762 aaPredicted RBP4.19□□□□□ -1.74
SNRNP25-201ENST00000293861 KRTAP5-11Q6L8G4 156 aa4.1□□□□□ -1.75
SNRNP25-201ENST00000293861 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
SNRNP25-201ENST00000293861 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
SNRNP25-201ENST00000293861 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
SNRNP25-201ENST00000293861 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
SNRNP25-201ENST00000293861 PHGR1C9JFL3 82 aa3.51□□□□□ -1.85
SNRNP25-201ENST00000293861 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
SNRNP25-201ENST00000293861 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
SNRNP25-201ENST00000293861 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 77.7 ms