RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 KRTAP2-1Q9BYU5 128 aa7.28□□□□□ -1.24
PAXBP1-201ENST00000290178 KRTAP4-3Q9BYR4 195 aa7.26□□□□□ -1.25
PAXBP1-201ENST00000290178 LCE2DQ5TA82 110 aaPredicted RBP7.24□□□□□ -1.25
PAXBP1-201ENST00000290178 MUC12Q9UKN1 5478 aa7.23□□□□□ -1.25
PAXBP1-201ENST00000290178 LOC100996750A0A140TA64 210 aa7.19□□□□□ -1.26
PAXBP1-201ENST00000290178 MT1GP13640 62 aa7.1□□□□□ -1.27
PAXBP1-201ENST00000290178 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
PAXBP1-201ENST00000290178 KRTAP19-3Q7Z4W3 81 aa7.07□□□□□ -1.28
PAXBP1-201ENST00000290178 MT1MQ8N339 61 aa7.07□□□□□ -1.28
PAXBP1-201ENST00000290178 CRCT1Q9UGL9 99 aa6.99□□□□□ -1.29
PAXBP1-201ENST00000290178 DSTQ03001 7570 aaKnown RBP6.96□□□□□ -1.3
PAXBP1-201ENST00000290178 SPRR2FQ96RM1 72 aa6.92□□□□□ -1.3
PAXBP1-201ENST00000290178 MACF1Q9UPN3 7388 aaKnown RBP6.88□□□□□ -1.31
PAXBP1-201ENST00000290178 LCE5AQ5TCM9 118 aa6.84□□□□□ -1.31
PAXBP1-201ENST00000290178 SYNE2Q8WXH0 6885 aaKnown RBP6.73□□□□□ -1.33
PAXBP1-201ENST00000290178 MDN1Q9NU22 5596 aa6.62□□□□□ -1.35
PAXBP1-201ENST00000290178 LCE3BQ5TA77 95 aa6.54□□□□□ -1.36
PAXBP1-201ENST00000290178 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
PAXBP1-201ENST00000290178 KRTAP12-4P60329 112 aa6.47□□□□□ -1.37
PAXBP1-201ENST00000290178 LCE1AQ5T7P2 110 aa6.44□□□□□ -1.38
PAXBP1-201ENST00000290178 KRTAP4-9Q9BYQ8 210 aa6.44□□□□□ -1.38
PAXBP1-201ENST00000290178 KRTAP6-1Q3LI64 71 aa6.44□□□□□ -1.38
PAXBP1-201ENST00000290178 SYNE1Q8NF91 8797 aaKnown RBP6.42□□□□□ -1.38
PAXBP1-201ENST00000290178 KRTAP5-9P26371 169 aa6.37□□□□□ -1.39
PAXBP1-201ENST00000290178 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.3□□□□□ -1.4
PAXBP1-201ENST00000290178 MT1AP04731 61 aa6.3□□□□□ -1.4
PAXBP1-201ENST00000290178 SPRR2EP22531 72 aa6.29□□□□□ -1.4
PAXBP1-201ENST00000290178 SPRR2BP35325 72 aa6.29□□□□□ -1.4
PAXBP1-201ENST00000290178 SPRR2AP35326 72 aa6.29□□□□□ -1.4
PAXBP1-201ENST00000290178 KRTAP5-5Q701N2 237 aaPredicted RBP6.24□□□□□ -1.41
PAXBP1-201ENST00000290178 LCE3DQ9BYE3 92 aa6.08□□□□□ -1.44
PAXBP1-201ENST00000290178 KRTAP6-3Q3LI67 103 aa6.07□□□□□ -1.44
PAXBP1-201ENST00000290178 SPRR2DP22532 72 aa6.01□□□□□ -1.45
PAXBP1-201ENST00000290178 LCE3EQ5T5B0 92 aa5.97□□□□□ -1.45
PAXBP1-201ENST00000290178 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
PAXBP1-201ENST00000290178 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
PAXBP1-201ENST00000290178 NEBP20929 6669 aa5.87□□□□□ -1.47
PAXBP1-201ENST00000290178 OBSCNQ5VST9 7968 aa5.83□□□□□ -1.48
PAXBP1-201ENST00000290178 KRTAP6-2Q3LI66 62 aa5.79□□□□□ -1.48
PAXBP1-201ENST00000290178 PRM1P04553 51 aa5.72□□□□□ -1.49
PAXBP1-201ENST00000290178 MT3P25713 68 aa5.66□□□□□ -1.5
PAXBP1-201ENST00000290178 KRTAP5-4Q6L8H1 288 aa5.5□□□□□ -1.53
PAXBP1-201ENST00000290178 KRTAP4-6Q9BYQ5 205 aa5.42□□□□□ -1.54
PAXBP1-201ENST00000290178 MT4P47944 62 aa5.37□□□□□ -1.55
PAXBP1-201ENST00000290178 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
PAXBP1-201ENST00000290178 KRTAP20-2Q3LI61 65 aa5.21□□□□□ -1.58
PAXBP1-201ENST00000290178 KRTAP2-2Q9BYT5 123 aa5.19□□□□□ -1.58
PAXBP1-201ENST00000290178 LCE4AQ5TA78 99 aa5.13□□□□□ -1.59
PAXBP1-201ENST00000290178 HMCN1Q96RW7 5635 aa5.13□□□□□ -1.59
PAXBP1-201ENST00000290178 KRTAP5-2Q701N4 177 aa5.12□□□□□ -1.59
PAXBP1-201ENST00000290178 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
PAXBP1-201ENST00000290178 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
PAXBP1-201ENST00000290178 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
PAXBP1-201ENST00000290178 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
PAXBP1-201ENST00000290178 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
PAXBP1-201ENST00000290178 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.7
PAXBP1-201ENST00000290178 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
PAXBP1-201ENST00000290178 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
PAXBP1-201ENST00000290178 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
PAXBP1-201ENST00000290178 LCE1CQ5T751 118 aa4.37□□□□□ -1.71
PAXBP1-201ENST00000290178 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
PAXBP1-201ENST00000290178 KRTAP21-2Q3LI59 83 aa4.14□□□□□ -1.75
PAXBP1-201ENST00000290178 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
PAXBP1-201ENST00000290178 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
PAXBP1-201ENST00000290178 GPR98Q8WXG9 6306 aa4.06□□□□□ -1.76
PAXBP1-201ENST00000290178 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
PAXBP1-201ENST00000290178 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
PAXBP1-201ENST00000290178 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.79
PAXBP1-201ENST00000290178 KRTAP5-11Q6L8G4 156 aa3.75□□□□□ -1.81
PAXBP1-201ENST00000290178 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
PAXBP1-201ENST00000290178 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
PAXBP1-201ENST00000290178 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
PAXBP1-201ENST00000290178 KRTAP21-1Q3LI58 79 aa3.53□□□□□ -1.84
PAXBP1-201ENST00000290178 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
PAXBP1-201ENST00000290178 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
PAXBP1-201ENST00000290178 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
PAXBP1-201ENST00000290178 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 8.9 ms