RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 KRTAP4-3Q9BYR4 195 aa6.54□□□□□ -1.36
TMED4-201ENST00000289577 MT1GP13640 62 aa6.5□□□□□ -1.37
TMED4-201ENST00000289577 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
TMED4-201ENST00000289577 MT1MQ8N339 61 aa6.47□□□□□ -1.37
TMED4-201ENST00000289577 KRTAP19-3Q7Z4W3 81 aa6.43□□□□□ -1.38
TMED4-201ENST00000289577 FCGBPQ9Y6R7 5405 aaPredicted RBP6.35□□□□□ -1.39
TMED4-201ENST00000289577 KRTAP12-4P60329 112 aa6.31□□□□□ -1.4
TMED4-201ENST00000289577 MUC12Q9UKN1 5478 aa6.29□□□□□ -1.4
TMED4-201ENST00000289577 CRCT1Q9UGL9 99 aa6.27□□□□□ -1.4
TMED4-201ENST00000289577 FSIP2Q5CZC0 6907 aa6.2□□□□□ -1.42
TMED4-201ENST00000289577 LCE5AQ5TCM9 118 aa6.19□□□□□ -1.42
TMED4-201ENST00000289577 LCE3BQ5TA77 95 aa6.05□□□□□ -1.44
TMED4-201ENST00000289577 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
TMED4-201ENST00000289577 MT1AP04731 61 aa6.02□□□□□ -1.45
TMED4-201ENST00000289577 KRTAP4-9Q9BYQ8 210 aa5.97□□□□□ -1.45
TMED4-201ENST00000289577 DSTQ03001 7570 aaKnown RBP5.97□□□□□ -1.45
TMED4-201ENST00000289577 KRTAP6-1Q3LI64 71 aa5.91□□□□□ -1.46
TMED4-201ENST00000289577 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
TMED4-201ENST00000289577 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
TMED4-201ENST00000289577 LCE3DQ9BYE3 92 aa5.81□□□□□ -1.48
TMED4-201ENST00000289577 LCE3EQ5T5B0 92 aa5.76□□□□□ -1.49
TMED4-201ENST00000289577 MACF1Q9UPN3 7388 aaKnown RBP5.75□□□□□ -1.49
TMED4-201ENST00000289577 KRTAP5-5Q701N2 237 aaPredicted RBP5.72□□□□□ -1.49
TMED4-201ENST00000289577 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.5
TMED4-201ENST00000289577 LCE1AQ5T7P2 110 aa5.62□□□□□ -1.51
TMED4-201ENST00000289577 PRM1P04553 51 aa5.61□□□□□ -1.51
TMED4-201ENST00000289577 MDN1Q9NU22 5596 aa5.57□□□□□ -1.52
TMED4-201ENST00000289577 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
TMED4-201ENST00000289577 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
TMED4-201ENST00000289577 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
TMED4-201ENST00000289577 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
TMED4-201ENST00000289577 SPRR2EP22531 72 aa5.4□□□□□ -1.55
TMED4-201ENST00000289577 SPRR2BP35325 72 aa5.4□□□□□ -1.55
TMED4-201ENST00000289577 SPRR2AP35326 72 aa5.4□□□□□ -1.55
TMED4-201ENST00000289577 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.55
TMED4-201ENST00000289577 MT3P25713 68 aa5.24□□□□□ -1.57
TMED4-201ENST00000289577 KRTAP6-3Q3LI67 103 aa5.18□□□□□ -1.58
TMED4-201ENST00000289577 SPRR2DP22532 72 aa5.15□□□□□ -1.58
TMED4-201ENST00000289577 KRTAP9-6A0A140TA67 174 aa5.09□□□□□ -1.59
TMED4-201ENST00000289577 KRTAP2-2Q9BYT5 123 aa5□□□□□ -1.61
TMED4-201ENST00000289577 OBSCNQ5VST9 7968 aa4.93□□□□□ -1.62
TMED4-201ENST00000289577 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
TMED4-201ENST00000289577 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
TMED4-201ENST00000289577 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
TMED4-201ENST00000289577 KRTAP5-3Q6L8H2 238 aa4.57□□□□□ -1.68
TMED4-201ENST00000289577 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
TMED4-201ENST00000289577 MT4P47944 62 aa4.53□□□□□ -1.68
TMED4-201ENST00000289577 NEBP20929 6669 aa4.52□□□□□ -1.69
TMED4-201ENST00000289577 LCE4AQ5TA78 99 aa4.49□□□□□ -1.69
TMED4-201ENST00000289577 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
TMED4-201ENST00000289577 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
TMED4-201ENST00000289577 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
TMED4-201ENST00000289577 KRTAP5-10Q6L8G5 202 aa4.25□□□□□ -1.73
TMED4-201ENST00000289577 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
TMED4-201ENST00000289577 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
TMED4-201ENST00000289577 KRTAP9-9Q9BYP9 154 aa4.21□□□□□ -1.74
TMED4-201ENST00000289577 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
TMED4-201ENST00000289577 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
TMED4-201ENST00000289577 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
TMED4-201ENST00000289577 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
TMED4-201ENST00000289577 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
TMED4-201ENST00000289577 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
TMED4-201ENST00000289577 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
TMED4-201ENST00000289577 KRTAP21-2Q3LI59 83 aa3.83□□□□□ -1.8
TMED4-201ENST00000289577 KRTAP21-1Q3LI58 79 aa3.6□□□□□ -1.83
TMED4-201ENST00000289577 KRTAP5-7Q6L8G8 165 aa3.58□□□□□ -1.84
TMED4-201ENST00000289577 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
TMED4-201ENST00000289577 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
TMED4-201ENST00000289577 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
TMED4-201ENST00000289577 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
TMED4-201ENST00000289577 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
TMED4-201ENST00000289577 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
TMED4-201ENST00000289577 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
TMED4-201ENST00000289577 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
TMED4-201ENST00000289577 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
TMED4-201ENST00000289577 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
TMED4-201ENST00000289577 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms