RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 KRTAP4-8A0A0G2JLE6 195 aa3.16□□□□□ -1.9
PTPDC1-201ENST00000288976 KRTAP4-8Q9BYQ9 185 aa3.16□□□□□ -1.9
PTPDC1-201ENST00000288976 SYNE2Q8WXH0 6885 aaKnown RBP3.16□□□□□ -1.9
PTPDC1-201ENST00000288976 KRTAP19-7Q3SYF9 63 aa3.12□□□□□ -1.91
PTPDC1-201ENST00000288976 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
PTPDC1-201ENST00000288976 KRTAP19-4Q3LI73 84 aa3.09□□□□□ -1.91
PTPDC1-201ENST00000288976 MT1EP04732 61 aa3.09□□□□□ -1.91
PTPDC1-201ENST00000288976 KMT2DO14686 5537 aa3.09□□□□□ -1.92
PTPDC1-201ENST00000288976 KRTAP9-7A8MTY7 169 aa3.07□□□□□ -1.92
PTPDC1-201ENST00000288976 SPRR2DP22532 72 aa3.05□□□□□ -1.92
PTPDC1-201ENST00000288976 NEBP20929 6669 aa3.02□□□□□ -1.93
PTPDC1-201ENST00000288976 MT1LQ93083 61 aa3.01□□□□□ -1.93
PTPDC1-201ENST00000288976 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
PTPDC1-201ENST00000288976 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
PTPDC1-201ENST00000288976 INE1O15225 51 aa2.99□□□□□ -1.93
PTPDC1-201ENST00000288976 MT1GP13640 62 aa2.98□□□□□ -1.93
PTPDC1-201ENST00000288976 LCE5AQ5TCM9 118 aa2.97□□□□□ -1.93
PTPDC1-201ENST00000288976 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
PTPDC1-201ENST00000288976 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
PTPDC1-201ENST00000288976 LCE3BQ5TA77 95 aa2.93□□□□□ -1.94
PTPDC1-201ENST00000288976 MUC12Q9UKN1 5478 aa2.93□□□□□ -1.94
PTPDC1-201ENST00000288976 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
PTPDC1-201ENST00000288976 MT1MQ8N339 61 aa2.92□□□□□ -1.94
PTPDC1-201ENST00000288976 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
PTPDC1-201ENST00000288976 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
PTPDC1-201ENST00000288976 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
PTPDC1-201ENST00000288976 MT4P47944 62 aa2.86□□□□□ -1.95
PTPDC1-201ENST00000288976 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
PTPDC1-201ENST00000288976 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
PTPDC1-201ENST00000288976 KRTAP4-7Q9BYR0 210 aa2.78□□□□□ -1.96
PTPDC1-201ENST00000288976 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
PTPDC1-201ENST00000288976 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
PTPDC1-201ENST00000288976 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
PTPDC1-201ENST00000288976 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
PTPDC1-201ENST00000288976 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
PTPDC1-201ENST00000288976 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
PTPDC1-201ENST00000288976 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
PTPDC1-201ENST00000288976 LCE1DQ5T752 114 aa2.64□□□□□ -1.99
PTPDC1-201ENST00000288976 LOC100996750A0A140TA64 210 aa2.63□□□□□ -1.99
PTPDC1-201ENST00000288976 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
PTPDC1-201ENST00000288976 LCE4AQ5TA78 99 aa2.63□□□□□ -1.99
PTPDC1-201ENST00000288976 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
PTPDC1-201ENST00000288976 MT1AP04731 61 aa2.59□□□□□ -2
PTPDC1-201ENST00000288976 KRTAP4-9Q9BYQ8 210 aa2.58□□□□□ -2
PTPDC1-201ENST00000288976 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2
PTPDC1-201ENST00000288976 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
PTPDC1-201ENST00000288976 MT3P25713 68 aa2.5□□□□□ -2.01
PTPDC1-201ENST00000288976 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
PTPDC1-201ENST00000288976 KRTAP9-4Q9BYQ2 154 aa2.46□□□□□ -2.02
PTPDC1-201ENST00000288976 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
PTPDC1-201ENST00000288976 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
PTPDC1-201ENST00000288976 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
PTPDC1-201ENST00000288976 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
PTPDC1-201ENST00000288976 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
PTPDC1-201ENST00000288976 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
PTPDC1-201ENST00000288976 LCE1EQ5T753 118 aa2.32□□□□□ -2.04
PTPDC1-201ENST00000288976 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
PTPDC1-201ENST00000288976 PRM1P04553 51 aa2.26□□□□□ -2.05
PTPDC1-201ENST00000288976 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
PTPDC1-201ENST00000288976 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
PTPDC1-201ENST00000288976 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
PTPDC1-201ENST00000288976 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
PTPDC1-201ENST00000288976 KRTAP4-11Q9BYQ6 195 aa2.12□□□□□ -2.07
PTPDC1-201ENST00000288976 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
PTPDC1-201ENST00000288976 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
PTPDC1-201ENST00000288976 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
PTPDC1-201ENST00000288976 KRTAP4-12Q9BQ66 201 aa1.97□□□□□ -2.09
PTPDC1-201ENST00000288976 KRTAP4-2Q9BYR5 136 aa1.97□□□□□ -2.09
PTPDC1-201ENST00000288976 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
PTPDC1-201ENST00000288976 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
PTPDC1-201ENST00000288976 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
PTPDC1-201ENST00000288976 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
PTPDC1-201ENST00000288976 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
PTPDC1-201ENST00000288976 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
PTPDC1-201ENST00000288976 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
PTPDC1-201ENST00000288976 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
PTPDC1-201ENST00000288976 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 66.5 ms