RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
VPS8-201ENST00000287546 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
VPS8-201ENST00000287546 KRTAP19-6Q3LI70 58 aa2.5□□□□□ -2.01
VPS8-201ENST00000287546 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
VPS8-201ENST00000287546 KRTAP4-8A0A0G2JLE6 195 aa2.48□□□□□ -2.01
VPS8-201ENST00000287546 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
VPS8-201ENST00000287546 KRTAP4-8Q9BYQ9 185 aa2.48□□□□□ -2.01
VPS8-201ENST00000287546 MUC12Q9UKN1 5478 aa2.43□□□□□ -2.02
VPS8-201ENST00000287546 MT4P47944 62 aa2.43□□□□□ -2.02
VPS8-201ENST00000287546 LCE3BQ5TA77 95 aa2.43□□□□□ -2.02
VPS8-201ENST00000287546 MT1GP13640 62 aa2.41□□□□□ -2.02
VPS8-201ENST00000287546 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.03
VPS8-201ENST00000287546 MT1EP04732 61 aa2.39□□□□□ -2.03
VPS8-201ENST00000287546 DSTQ03001 7570 aaKnown RBP2.39□□□□□ -2.03
VPS8-201ENST00000287546 MT1LQ93083 61 aa2.37□□□□□ -2.03
VPS8-201ENST00000287546 KRTAP9-7A8MTY7 169 aa2.37□□□□□ -2.03
VPS8-201ENST00000287546 KRTAP19-7Q3SYF9 63 aa2.36□□□□□ -2.03
VPS8-201ENST00000287546 MDN1Q9NU22 5596 aa2.36□□□□□ -2.03
VPS8-201ENST00000287546 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.35□□□□□ -2.03
VPS8-201ENST00000287546 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.04
VPS8-201ENST00000287546 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
VPS8-201ENST00000287546 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
VPS8-201ENST00000287546 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
VPS8-201ENST00000287546 LCE1DQ5T752 114 aa2.3□□□□□ -2.04
VPS8-201ENST00000287546 MT3P25713 68 aa2.29□□□□□ -2.04
VPS8-201ENST00000287546 KRTAP2-3P0C7H8 128 aa2.29□□□□□ -2.04
VPS8-201ENST00000287546 LCE5AQ5TCM9 118 aa2.29□□□□□ -2.04
VPS8-201ENST00000287546 KRTAP2-4Q9BYR9 128 aa2.29□□□□□ -2.04
VPS8-201ENST00000287546 MT1MQ8N339 61 aa2.26□□□□□ -2.05
VPS8-201ENST00000287546 KRTAP4-7Q9BYR0 210 aa2.25□□□□□ -2.05
VPS8-201ENST00000287546 KRTAP6-3Q3LI67 103 aa2.22□□□□□ -2.05
VPS8-201ENST00000287546 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
VPS8-201ENST00000287546 LCE1EQ5T753 118 aa2.21□□□□□ -2.06
VPS8-201ENST00000287546 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
VPS8-201ENST00000287546 LCE1AQ5T7P2 110 aa2.21□□□□□ -2.06
VPS8-201ENST00000287546 KRTAP5-9P26371 169 aa2.18□□□□□ -2.06
VPS8-201ENST00000287546 KRTAP4-3Q9BYR4 195 aa2.18□□□□□ -2.06
VPS8-201ENST00000287546 KRTAP2-2Q9BYT5 123 aa2.17□□□□□ -2.06
VPS8-201ENST00000287546 KRTAP2-1Q9BYU5 128 aa2.17□□□□□ -2.06
VPS8-201ENST00000287546 KRTAP9-6A8MVA2 160 aa2.16□□□□□ -2.06
VPS8-201ENST00000287546 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.07
VPS8-201ENST00000287546 NEBP20929 6669 aa2.12□□□□□ -2.07
VPS8-201ENST00000287546 LOC100996750A0A140TA64 210 aa2.1□□□□□ -2.07
VPS8-201ENST00000287546 LCE4AQ5TA78 99 aa2.08□□□□□ -2.08
VPS8-201ENST00000287546 MT1AP04731 61 aa2.08□□□□□ -2.08
VPS8-201ENST00000287546 KRTAP9-9Q9BYP9 154 aa2.07□□□□□ -2.08
VPS8-201ENST00000287546 KRTAP4-9Q9BYQ8 210 aa2.02□□□□□ -2.09
VPS8-201ENST00000287546 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
VPS8-201ENST00000287546 KRTAP9-4Q9BYQ2 154 aa1.93□□□□□ -2.1
VPS8-201ENST00000287546 PRM1P04553 51 aa1.88□□□□□ -2.11
VPS8-201ENST00000287546 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
VPS8-201ENST00000287546 KRTAP4-6Q9BYQ5 205 aa1.85□□□□□ -2.11
VPS8-201ENST00000287546 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
VPS8-201ENST00000287546 KRTAP5-5Q701N2 237 aaPredicted RBP1.85□□□□□ -2.11
VPS8-201ENST00000287546 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.12
VPS8-201ENST00000287546 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
VPS8-201ENST00000287546 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
VPS8-201ENST00000287546 KRTAP20-2Q3LI61 65 aa1.75□□□□□ -2.13
VPS8-201ENST00000287546 AHNAK2Q8IVF2 5795 aa1.73□□□□□ -2.13
VPS8-201ENST00000287546 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
VPS8-201ENST00000287546 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
VPS8-201ENST00000287546 KRTAP5-3Q6L8H2 238 aa1.63□□□□□ -2.15
VPS8-201ENST00000287546 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
VPS8-201ENST00000287546 KRTAP4-11Q9BYQ6 195 aa1.56□□□□□ -2.16
VPS8-201ENST00000287546 MUC5ACP98088 5654 aa1.56□□□□□ -2.16
VPS8-201ENST00000287546 KRTAP4-2Q9BYR5 136 aa1.55□□□□□ -2.16
VPS8-201ENST00000287546 KRTAP4-12Q9BQ66 201 aa1.54□□□□□ -2.16
VPS8-201ENST00000287546 KRTAP5-10Q6L8G5 202 aa1.49□□□□□ -2.17
VPS8-201ENST00000287546 KRTAP5-8O75690 187 aa1.45□□□□□ -2.18
VPS8-201ENST00000287546 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
VPS8-201ENST00000287546 KRTAP4-4Q9BYR3 166 aa1.43□□□□□ -2.18
VPS8-201ENST00000287546 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
VPS8-201ENST00000287546 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.29□□□□□ -2.2
VPS8-201ENST00000287546 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
VPS8-201ENST00000287546 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
VPS8-201ENST00000287546 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
VPS8-201ENST00000287546 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms