RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 HTN1P15515 57 aa0.97□□□□□ -2.25
CHD1-201ENST00000284049 KRTAP6-3Q3LI67 103 aa0.97□□□□□ -2.25
CHD1-201ENST00000284049 KRTAP19-8Q3LI54 63 aa0.97□□□□□ -2.25
CHD1-201ENST00000284049 USH2AO75445 5202 aa0.97□□□□□ -2.25
CHD1-201ENST00000284049 MUC12Q9UKN1 5478 aa0.97□□□□□ -2.25
CHD1-201ENST00000284049 HTN3P15516 51 aa0.97□□□□□ -2.25
CHD1-201ENST00000284049 PRLHP81277 87 aa0.96□□□□□ -2.26
CHD1-201ENST00000284049 KMT2DO14686 5537 aa0.95□□□□□ -2.26
CHD1-201ENST00000284049 SPRR2GQ9BYE4 73 aa0.95□□□□□ -2.26
CHD1-201ENST00000284049 GPR98Q8WXG9 6306 aa0.94□□□□□ -2.26
CHD1-201ENST00000284049 KRTAP9-6A8MVA2 160 aa0.94□□□□□ -2.26
CHD1-201ENST00000284049 KRTAP4-1Q9BYQ7 146 aa0.94□□□□□ -2.26
CHD1-201ENST00000284049 TOMM7Q9P0U1 55 aa0.94□□□□□ -2.26
CHD1-201ENST00000284049 MUC2Q02817 5179 aa0.93□□□□□ -2.26
CHD1-201ENST00000284049 KRTAP19-6Q3LI70 58 aa0.92□□□□□ -2.26
CHD1-201ENST00000284049 KRTAP5-9P26371 169 aa0.91□□□□□ -2.26
CHD1-201ENST00000284049 MT1HP80294 61 aa0.91□□□□□ -2.26
CHD1-201ENST00000284049 LPAP08519 4548 aa0.9□□□□□ -2.26
CHD1-201ENST00000284049 KRTAP5-4Q6L8H1 288 aa0.89□□□□□ -2.27
CHD1-201ENST00000284049 MT2AP02795 61 aa0.88□□□□□ -2.27
CHD1-201ENST00000284049 M0QZ58 72 aa0.88□□□□□ -2.27
CHD1-201ENST00000284049 M0R2T5 61 aa0.87□□□□□ -2.27
CHD1-201ENST00000284049 FCGBPQ9Y6R7 5405 aaPredicted RBP0.86□□□□□ -2.27
CHD1-201ENST00000284049 MT1BP07438 61 aa0.86□□□□□ -2.27
CHD1-201ENST00000284049 KRTAP5-5Q701N2 237 aaPredicted RBP0.86□□□□□ -2.27
CHD1-201ENST00000284049 SMR3BP02814 79 aaPredicted RBP0.86□□□□□ -2.27
CHD1-201ENST00000284049 S4R3F8 94 aa0.85□□□□□ -2.27
CHD1-201ENST00000284049 MT1FP04733 61 aa0.85□□□□□ -2.27
CHD1-201ENST00000284049 TNP1P09430 55 aa0.83□□□□□ -2.28
CHD1-201ENST00000284049 C9orf92A6NGG3 77 aa0.83□□□□□ -2.28
CHD1-201ENST00000284049 KRTAP8-1Q8IUC2 63 aa0.82□□□□□ -2.28
CHD1-201ENST00000284049 KRTAP4-4Q9BYR3 166 aa0.81□□□□□ -2.28
CHD1-201ENST00000284049 MDN1Q9NU22 5596 aa0.81□□□□□ -2.28
CHD1-201ENST00000284049 MT1XP80297 61 aa0.8□□□□□ -2.28
CHD1-201ENST00000284049 KRTAP5-11Q6L8G4 156 aa0.79□□□□□ -2.28
CHD1-201ENST00000284049 KRTAP5-8O75690 187 aa0.77□□□□□ -2.29
CHD1-201ENST00000284049 CRCT1Q9UGL9 99 aa0.77□□□□□ -2.29
CHD1-201ENST00000284049 KRTAP19-7Q3SYF9 63 aa0.76□□□□□ -2.29
CHD1-201ENST00000284049 DSTQ03001 7570 aaKnown RBP0.74□□□□□ -2.29
CHD1-201ENST00000284049 NEBP20929 6669 aa0.74□□□□□ -2.29
CHD1-201ENST00000284049 AHNAKQ09666 5890 aaKnown RBP0.74□□□□□ -2.29
CHD1-201ENST00000284049 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
CHD1-201ENST00000284049 MT1EP04732 61 aa0.72□□□□□ -2.29
CHD1-201ENST00000284049 MT1GP13640 62 aa0.71□□□□□ -2.3
CHD1-201ENST00000284049 LCE1CQ5T751 118 aa0.71□□□□□ -2.3
CHD1-201ENST00000284049 LCE1BQ5T7P3 118 aa0.71□□□□□ -2.3
CHD1-201ENST00000284049 MT1LQ93083 61 aa0.7□□□□□ -2.3
CHD1-201ENST00000284049 KRTAP5-1Q6L8H4 278 aa0.7□□□□□ -2.3
CHD1-201ENST00000284049 KRTAP19-3Q7Z4W3 81 aa0.69□□□□□ -2.3
CHD1-201ENST00000284049 KRTAP19-5Q3LI72 72 aa0.69□□□□□ -2.3
CHD1-201ENST00000284049 KRTAP5-7Q6L8G8 165 aa0.68□□□□□ -2.3
CHD1-201ENST00000284049 MT1MQ8N339 61 aa0.68□□□□□ -2.3
CHD1-201ENST00000284049 KRTAP5-10Q6L8G5 202 aa0.68□□□□□ -2.3
CHD1-201ENST00000284049 MACF1Q9UPN3 7388 aaKnown RBP0.67□□□□□ -2.3
CHD1-201ENST00000284049 KRTAP2-3P0C7H8 128 aa0.66□□□□□ -2.3
CHD1-201ENST00000284049 KRTAP2-4Q9BYR9 128 aa0.66□□□□□ -2.3
CHD1-201ENST00000284049 KRTAP2-1Q9BYU5 128 aa0.66□□□□□ -2.3
CHD1-201ENST00000284049 KRTAP20-1Q3LI63 56 aa0.65□□□□□ -2.31
CHD1-201ENST00000284049 SPRR2BP35325 72 aa0.64□□□□□ -2.31
CHD1-201ENST00000284049 MT1AP04731 61 aa0.63□□□□□ -2.31
CHD1-201ENST00000284049 FSIP2Q5CZC0 6907 aa0.6□□□□□ -2.31
CHD1-201ENST00000284049 SPRR2DP22532 72 aa0.6□□□□□ -2.31
CHD1-201ENST00000284049 PRM1P04553 51 aa0.59□□□□□ -2.32
CHD1-201ENST00000284049 MUC5ACP98088 5654 aa0.59□□□□□ -2.32
CHD1-201ENST00000284049 KRTAP4-3Q9BYR4 195 aa0.58□□□□□ -2.32
CHD1-201ENST00000284049 KRTAP20-2Q3LI61 65 aa0.58□□□□□ -2.32
CHD1-201ENST00000284049 SYNE2Q8WXH0 6885 aaKnown RBP0.58□□□□□ -2.32
CHD1-201ENST00000284049 SPRR2AP35326 72 aa0.57□□□□□ -2.32
CHD1-201ENST00000284049 SPRR2FQ96RM1 72 aa0.55□□□□□ -2.32
CHD1-201ENST00000284049 SPRR2EP22531 72 aa0.53□□□□□ -2.32
CHD1-201ENST00000284049 KRTAP6-1Q3LI64 71 aa0.52□□□□□ -2.33
CHD1-201ENST00000284049 KRTAP21-1Q3LI58 79 aa0.48□□□□□ -2.33
CHD1-201ENST00000284049 KRTAP21-2Q3LI59 83 aa0.45□□□□□ -2.34
CHD1-201ENST00000284049 KRTAP6-2Q3LI66 62 aa0.45□□□□□ -2.34
CHD1-201ENST00000284049 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
CHD1-201ENST00000284049 MUC16Q8WXI7 14507 aa0.39□□□□□ -2.35
CHD1-201ENST00000284049 MT4P47944 62 aa0.35□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 15.1 ms