RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 MT1XP80297 61 aa3.66□□□□□ -1.82
ERGIC3-201ENST00000279052 CRCT1Q9UGL9 99 aa3.66□□□□□ -1.82
ERGIC3-201ENST00000279052 KRTAP12-4P60329 112 aa3.65□□□□□ -1.82
ERGIC3-201ENST00000279052 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
ERGIC3-201ENST00000279052 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
ERGIC3-201ENST00000279052 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
ERGIC3-201ENST00000279052 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
ERGIC3-201ENST00000279052 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
ERGIC3-201ENST00000279052 USH2AO75445 5202 aa3.5□□□□□ -1.85
ERGIC3-201ENST00000279052 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
ERGIC3-201ENST00000279052 LCE5AQ5TCM9 118 aa3.48□□□□□ -1.85
ERGIC3-201ENST00000279052 FSIP2Q5CZC0 6907 aa3.39□□□□□ -1.87
ERGIC3-201ENST00000279052 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
ERGIC3-201ENST00000279052 KMT2DO14686 5537 aa3.38□□□□□ -1.87
ERGIC3-201ENST00000279052 PRM1P04553 51 aa3.34□□□□□ -1.87
ERGIC3-201ENST00000279052 KRTAP4-8A0A0G2JLE6 195 aa3.34□□□□□ -1.87
ERGIC3-201ENST00000279052 SSPOA2VEC9 5147 aa3.32□□□□□ -1.88
ERGIC3-201ENST00000279052 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
ERGIC3-201ENST00000279052 KRTAP19-7Q3SYF9 63 aa3.25□□□□□ -1.89
ERGIC3-201ENST00000279052 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
ERGIC3-201ENST00000279052 KRTAP20-1Q3LI63 56 aa3.22□□□□□ -1.89
ERGIC3-201ENST00000279052 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
ERGIC3-201ENST00000279052 MT1LQ93083 61 aa3.18□□□□□ -1.9
ERGIC3-201ENST00000279052 MT1EP04732 61 aa3.17□□□□□ -1.9
ERGIC3-201ENST00000279052 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
ERGIC3-201ENST00000279052 KRTAP4-11Q9BYQ6 195 aa3.16□□□□□ -1.9
ERGIC3-201ENST00000279052 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
ERGIC3-201ENST00000279052 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
ERGIC3-201ENST00000279052 MT1AP04731 61 aa3.07□□□□□ -1.92
ERGIC3-201ENST00000279052 KRTAP19-6Q3LI70 58 aa3.04□□□□□ -1.92
ERGIC3-201ENST00000279052 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
ERGIC3-201ENST00000279052 MT3P25713 68 aa3.04□□□□□ -1.92
ERGIC3-201ENST00000279052 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
ERGIC3-201ENST00000279052 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
ERGIC3-201ENST00000279052 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
ERGIC3-201ENST00000279052 MT1GP13640 62 aa2.99□□□□□ -1.93
ERGIC3-201ENST00000279052 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
ERGIC3-201ENST00000279052 FCGBPQ9Y6R7 5405 aaPredicted RBP2.97□□□□□ -1.93
ERGIC3-201ENST00000279052 NEBP20929 6669 aa2.97□□□□□ -1.93
ERGIC3-201ENST00000279052 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.93
ERGIC3-201ENST00000279052 MT1MQ8N339 61 aa2.96□□□□□ -1.94
ERGIC3-201ENST00000279052 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
ERGIC3-201ENST00000279052 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
ERGIC3-201ENST00000279052 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
ERGIC3-201ENST00000279052 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
ERGIC3-201ENST00000279052 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
ERGIC3-201ENST00000279052 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
ERGIC3-201ENST00000279052 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
ERGIC3-201ENST00000279052 MDN1Q9NU22 5596 aa2.74□□□□□ -1.97
ERGIC3-201ENST00000279052 MUC5BQ9HC84 5762 aaPredicted RBP2.72□□□□□ -1.97
ERGIC3-201ENST00000279052 KRTAP5-9P26371 169 aa2.71□□□□□ -1.98
ERGIC3-201ENST00000279052 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
ERGIC3-201ENST00000279052 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.99
ERGIC3-201ENST00000279052 SPRR2AP35326 72 aa2.64□□□□□ -1.99
ERGIC3-201ENST00000279052 SPRR2DP22532 72 aa2.6□□□□□ -1.99
ERGIC3-201ENST00000279052 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
ERGIC3-201ENST00000279052 SPRR2BP35325 72 aa2.57□□□□□ -2
ERGIC3-201ENST00000279052 KRTAP5-10Q6L8G5 202 aa2.57□□□□□ -2
ERGIC3-201ENST00000279052 SPRR2EP22531 72 aa2.56□□□□□ -2
ERGIC3-201ENST00000279052 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
ERGIC3-201ENST00000279052 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
ERGIC3-201ENST00000279052 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
ERGIC3-201ENST00000279052 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
ERGIC3-201ENST00000279052 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
ERGIC3-201ENST00000279052 KRTAP5-4Q6L8H1 288 aa2.23□□□□□ -2.05
ERGIC3-201ENST00000279052 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
ERGIC3-201ENST00000279052 MT4P47944 62 aa2.17□□□□□ -2.06
ERGIC3-201ENST00000279052 MUC5ACP98088 5654 aa2.15□□□□□ -2.06
ERGIC3-201ENST00000279052 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
ERGIC3-201ENST00000279052 KRTAP20-2Q3LI61 65 aa2.11□□□□□ -2.07
ERGIC3-201ENST00000279052 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
ERGIC3-201ENST00000279052 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
ERGIC3-201ENST00000279052 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
ERGIC3-201ENST00000279052 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
ERGIC3-201ENST00000279052 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
ERGIC3-201ENST00000279052 KRTAP4-4Q9BYR3 166 aa1.62□□□□□ -2.15
ERGIC3-201ENST00000279052 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
ERGIC3-201ENST00000279052 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 358 ms