RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 KRTAP19-6Q3LI70 58 aa3.17□□□□□ -1.9
SEC16A-201ENST00000277537 KRTAP19-7Q3SYF9 63 aa3.13□□□□□ -1.91
SEC16A-201ENST00000277537 MT1EP04732 61 aa3.12□□□□□ -1.91
SEC16A-201ENST00000277537 MT1LQ93083 61 aa3.1□□□□□ -1.91
SEC16A-201ENST00000277537 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
SEC16A-201ENST00000277537 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
SEC16A-201ENST00000277537 MT1GP13640 62 aa3.07□□□□□ -1.92
SEC16A-201ENST00000277537 KRTAP9-6A0A140TA67 174 aa3.05□□□□□ -1.92
SEC16A-201ENST00000277537 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
SEC16A-201ENST00000277537 KRTAP4-3Q9BYR4 195 aa3.04□□□□□ -1.92
SEC16A-201ENST00000277537 KRTAP19-3Q7Z4W3 81 aa3.02□□□□□ -1.93
SEC16A-201ENST00000277537 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
SEC16A-201ENST00000277537 LOC100996750A0A140TA64 210 aa2.99□□□□□ -1.93
SEC16A-201ENST00000277537 SPRR2EP22531 72 aa2.98□□□□□ -1.93
SEC16A-201ENST00000277537 SPRR2BP35325 72 aa2.98□□□□□ -1.93
SEC16A-201ENST00000277537 SPRR2AP35326 72 aa2.98□□□□□ -1.93
SEC16A-201ENST00000277537 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
SEC16A-201ENST00000277537 MT1MQ8N339 61 aa2.96□□□□□ -1.94
SEC16A-201ENST00000277537 LCE3BQ5TA77 95 aa2.88□□□□□ -1.95
SEC16A-201ENST00000277537 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.87□□□□□ -1.95
SEC16A-201ENST00000277537 SPRR2DP22532 72 aa2.86□□□□□ -1.95
SEC16A-201ENST00000277537 MT3P25713 68 aa2.84□□□□□ -1.95
SEC16A-201ENST00000277537 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
SEC16A-201ENST00000277537 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
SEC16A-201ENST00000277537 LCE5AQ5TCM9 118 aa2.8□□□□□ -1.96
SEC16A-201ENST00000277537 MDN1Q9NU22 5596 aa2.8□□□□□ -1.96
SEC16A-201ENST00000277537 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
SEC16A-201ENST00000277537 LCE1AQ5T7P2 110 aa2.76□□□□□ -1.97
SEC16A-201ENST00000277537 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
SEC16A-201ENST00000277537 KRTAP4-9Q9BYQ8 210 aa2.74□□□□□ -1.97
SEC16A-201ENST00000277537 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
SEC16A-201ENST00000277537 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
SEC16A-201ENST00000277537 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.98
SEC16A-201ENST00000277537 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
SEC16A-201ENST00000277537 MT1AP04731 61 aa2.62□□□□□ -1.99
SEC16A-201ENST00000277537 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
SEC16A-201ENST00000277537 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
SEC16A-201ENST00000277537 MT4P47944 62 aa2.6□□□□□ -1.99
SEC16A-201ENST00000277537 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
SEC16A-201ENST00000277537 KRTAP9-4Q9BYQ2 154 aa2.55□□□□□ -2
SEC16A-201ENST00000277537 KRTAP2-2Q9BYT5 123 aa2.55□□□□□ -2
SEC16A-201ENST00000277537 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
SEC16A-201ENST00000277537 NEBP20929 6669 aa2.52□□□□□ -2.01
SEC16A-201ENST00000277537 PRM1P04553 51 aa2.49□□□□□ -2.01
SEC16A-201ENST00000277537 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
SEC16A-201ENST00000277537 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
SEC16A-201ENST00000277537 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
SEC16A-201ENST00000277537 LCE4AQ5TA78 99 aa2.43□□□□□ -2.02
SEC16A-201ENST00000277537 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
SEC16A-201ENST00000277537 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
SEC16A-201ENST00000277537 KRTAP4-6Q9BYQ5 205 aa2.37□□□□□ -2.03
SEC16A-201ENST00000277537 LCE1DQ5T752 114 aa2.32□□□□□ -2.04
SEC16A-201ENST00000277537 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
SEC16A-201ENST00000277537 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
SEC16A-201ENST00000277537 KRTAP9-9Q9BYP9 154 aa2.23□□□□□ -2.05
SEC16A-201ENST00000277537 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
SEC16A-201ENST00000277537 KRTAP5-4Q6L8H1 288 aa2.17□□□□□ -2.06
SEC16A-201ENST00000277537 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
SEC16A-201ENST00000277537 KRTAP5-3Q6L8H2 238 aa1.97□□□□□ -2.09
SEC16A-201ENST00000277537 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
SEC16A-201ENST00000277537 KRTAP4-11Q9BYQ6 195 aa1.95□□□□□ -2.1
SEC16A-201ENST00000277537 AHNAK2Q8IVF2 5795 aa1.88□□□□□ -2.11
SEC16A-201ENST00000277537 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
SEC16A-201ENST00000277537 KRTAP4-12Q9BQ66 201 aa1.78□□□□□ -2.12
SEC16A-201ENST00000277537 KRTAP4-2Q9BYR5 136 aa1.78□□□□□ -2.12
SEC16A-201ENST00000277537 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
SEC16A-201ENST00000277537 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
SEC16A-201ENST00000277537 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
SEC16A-201ENST00000277537 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
SEC16A-201ENST00000277537 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
SEC16A-201ENST00000277537 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
SEC16A-201ENST00000277537 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
SEC16A-201ENST00000277537 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
SEC16A-201ENST00000277537 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
SEC16A-201ENST00000277537 KRTAP5-11Q6L8G4 156 aa1.52□□□□□ -2.17
SEC16A-201ENST00000277537 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
SEC16A-201ENST00000277537 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
SEC16A-201ENST00000277537 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms