RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
SSC4D-201ENST00000275560 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.43
SSC4D-201ENST00000275560 MT1GP13640 62 aa6.06□□□□□ -1.44
SSC4D-201ENST00000275560 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
SSC4D-201ENST00000275560 DSTQ03001 7570 aaKnown RBP6.02□□□□□ -1.45
SSC4D-201ENST00000275560 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
SSC4D-201ENST00000275560 KRTAP12-4P60329 112 aa5.93□□□□□ -1.46
SSC4D-201ENST00000275560 LCE2DQ5TA82 110 aaPredicted RBP5.91□□□□□ -1.46
SSC4D-201ENST00000275560 MT1MQ8N339 61 aa5.84□□□□□ -1.47
SSC4D-201ENST00000275560 KRTAP19-3Q7Z4W3 81 aa5.76□□□□□ -1.49
SSC4D-201ENST00000275560 KRTAP19-6Q3LI70 58 aa5.75□□□□□ -1.49
SSC4D-201ENST00000275560 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
SSC4D-201ENST00000275560 LCE3BQ5TA77 95 aa5.71□□□□□ -1.49
SSC4D-201ENST00000275560 SYNE1Q8NF91 8797 aaKnown RBP5.69□□□□□ -1.5
SSC4D-201ENST00000275560 LCE5AQ5TCM9 118 aa5.51□□□□□ -1.53
SSC4D-201ENST00000275560 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
SSC4D-201ENST00000275560 SYNE2Q8WXH0 6885 aaKnown RBP5.48□□□□□ -1.53
SSC4D-201ENST00000275560 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.54
SSC4D-201ENST00000275560 KRTAP6-1Q3LI64 71 aa5.45□□□□□ -1.54
SSC4D-201ENST00000275560 MACF1Q9UPN3 7388 aaKnown RBP5.43□□□□□ -1.54
SSC4D-201ENST00000275560 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
SSC4D-201ENST00000275560 MDN1Q9NU22 5596 aa5.39□□□□□ -1.55
SSC4D-201ENST00000275560 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
SSC4D-201ENST00000275560 MT1AP04731 61 aa5.33□□□□□ -1.56
SSC4D-201ENST00000275560 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
SSC4D-201ENST00000275560 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
SSC4D-201ENST00000275560 PRM1P04553 51 aa5.31□□□□□ -1.56
SSC4D-201ENST00000275560 LCE3EQ5T5B0 92 aa5.28□□□□□ -1.56
SSC4D-201ENST00000275560 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
SSC4D-201ENST00000275560 LCE1AQ5T7P2 110 aa5□□□□□ -1.61
SSC4D-201ENST00000275560 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
SSC4D-201ENST00000275560 KRTAP5-9P26371 169 aa4.87□□□□□ -1.63
SSC4D-201ENST00000275560 SPRR2EP22531 72 aa4.86□□□□□ -1.63
SSC4D-201ENST00000275560 SPRR2BP35325 72 aa4.86□□□□□ -1.63
SSC4D-201ENST00000275560 SPRR2AP35326 72 aa4.86□□□□□ -1.63
SSC4D-201ENST00000275560 KRTAP9-6A0A140TA67 174 aa4.81□□□□□ -1.64
SSC4D-201ENST00000275560 KRTAP6-3Q3LI67 103 aa4.75□□□□□ -1.65
SSC4D-201ENST00000275560 MT3P25713 68 aa4.67□□□□□ -1.66
SSC4D-201ENST00000275560 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
SSC4D-201ENST00000275560 SPRR2DP22532 72 aa4.61□□□□□ -1.67
SSC4D-201ENST00000275560 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.6□□□□□ -1.67
SSC4D-201ENST00000275560 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
SSC4D-201ENST00000275560 NEBP20929 6669 aa4.25□□□□□ -1.73
SSC4D-201ENST00000275560 MT4P47944 62 aa4.21□□□□□ -1.74
SSC4D-201ENST00000275560 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
SSC4D-201ENST00000275560 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
SSC4D-201ENST00000275560 LCE1EQ5T753 118 aa4.13□□□□□ -1.75
SSC4D-201ENST00000275560 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
SSC4D-201ENST00000275560 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
SSC4D-201ENST00000275560 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.76
SSC4D-201ENST00000275560 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
SSC4D-201ENST00000275560 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
SSC4D-201ENST00000275560 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
SSC4D-201ENST00000275560 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
SSC4D-201ENST00000275560 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
SSC4D-201ENST00000275560 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
SSC4D-201ENST00000275560 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
SSC4D-201ENST00000275560 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
SSC4D-201ENST00000275560 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.84
SSC4D-201ENST00000275560 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
SSC4D-201ENST00000275560 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
SSC4D-201ENST00000275560 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
SSC4D-201ENST00000275560 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
SSC4D-201ENST00000275560 KRTAP21-1Q3LI58 79 aa3.27□□□□□ -1.89
SSC4D-201ENST00000275560 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
SSC4D-201ENST00000275560 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
SSC4D-201ENST00000275560 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
SSC4D-201ENST00000275560 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
SSC4D-201ENST00000275560 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
SSC4D-201ENST00000275560 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
SSC4D-201ENST00000275560 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
SSC4D-201ENST00000275560 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
SSC4D-201ENST00000275560 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
SSC4D-201ENST00000275560 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
SSC4D-201ENST00000275560 PHGR1C9JFL3 82 aa2.58□□□□□ -2
SSC4D-201ENST00000275560 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
SSC4D-201ENST00000275560 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 90.8 ms