RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
HMGCLL1-201ENST00000274901 KRTAP19-7Q3SYF9 63 aa3.12□□□□□ -1.91
HMGCLL1-201ENST00000274901 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
HMGCLL1-201ENST00000274901 KRTAP19-6Q3LI70 58 aa3.09□□□□□ -1.91
HMGCLL1-201ENST00000274901 KRTAP9-2Q9BYQ4 174 aa3.09□□□□□ -1.91
HMGCLL1-201ENST00000274901 KRTAP9-6A0A140TA67 174 aa3.08□□□□□ -1.92
HMGCLL1-201ENST00000274901 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.07□□□□□ -1.92
HMGCLL1-201ENST00000274901 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
HMGCLL1-201ENST00000274901 LCE3BQ5TA77 95 aa3.05□□□□□ -1.92
HMGCLL1-201ENST00000274901 FCGBPQ9Y6R7 5405 aaPredicted RBP3.05□□□□□ -1.92
HMGCLL1-201ENST00000274901 MT1LQ93083 61 aa3.03□□□□□ -1.92
HMGCLL1-201ENST00000274901 KRTAP12-4P60329 112 aa3□□□□□ -1.93
HMGCLL1-201ENST00000274901 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
HMGCLL1-201ENST00000274901 MT1EP04732 61 aa2.98□□□□□ -1.93
HMGCLL1-201ENST00000274901 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
HMGCLL1-201ENST00000274901 KRTAP4-3Q9BYR4 195 aa2.96□□□□□ -1.94
HMGCLL1-201ENST00000274901 MACF1Q9UPN3 7388 aaKnown RBP2.94□□□□□ -1.94
HMGCLL1-201ENST00000274901 KRTAP19-4Q3LI73 84 aa2.93□□□□□ -1.94
HMGCLL1-201ENST00000274901 MUC12Q9UKN1 5478 aa2.92□□□□□ -1.94
HMGCLL1-201ENST00000274901 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
HMGCLL1-201ENST00000274901 KRTAP9-9Q9BYP9 154 aa2.92□□□□□ -1.94
HMGCLL1-201ENST00000274901 MT1GP13640 62 aa2.9□□□□□ -1.95
HMGCLL1-201ENST00000274901 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
HMGCLL1-201ENST00000274901 LCE1DQ5T752 114 aa2.88□□□□□ -1.95
HMGCLL1-201ENST00000274901 CRCT1Q9UGL9 99 aa2.88□□□□□ -1.95
HMGCLL1-201ENST00000274901 KRTAP4-12Q9BQ66 201 aa2.84□□□□□ -1.96
HMGCLL1-201ENST00000274901 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
HMGCLL1-201ENST00000274901 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
HMGCLL1-201ENST00000274901 DSTQ03001 7570 aaKnown RBP2.8□□□□□ -1.96
HMGCLL1-201ENST00000274901 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.96
HMGCLL1-201ENST00000274901 KRTAP9-7A8MTY7 169 aa2.77□□□□□ -1.97
HMGCLL1-201ENST00000274901 MT1MQ8N339 61 aa2.76□□□□□ -1.97
HMGCLL1-201ENST00000274901 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
HMGCLL1-201ENST00000274901 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
HMGCLL1-201ENST00000274901 LCE1AQ5T7P2 110 aa2.74□□□□□ -1.97
HMGCLL1-201ENST00000274901 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
HMGCLL1-201ENST00000274901 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
HMGCLL1-201ENST00000274901 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
HMGCLL1-201ENST00000274901 PRM1P04553 51 aa2.71□□□□□ -1.97
HMGCLL1-201ENST00000274901 LCE4AQ5TA78 99 aa2.7□□□□□ -1.98
HMGCLL1-201ENST00000274901 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
HMGCLL1-201ENST00000274901 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
HMGCLL1-201ENST00000274901 MT1AP04731 61 aa2.64□□□□□ -1.99
HMGCLL1-201ENST00000274901 SPRR2EP22531 72 aa2.64□□□□□ -1.99
HMGCLL1-201ENST00000274901 SPRR2BP35325 72 aa2.64□□□□□ -1.99
HMGCLL1-201ENST00000274901 SPRR2AP35326 72 aa2.64□□□□□ -1.99
HMGCLL1-201ENST00000274901 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
HMGCLL1-201ENST00000274901 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
HMGCLL1-201ENST00000274901 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
HMGCLL1-201ENST00000274901 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
HMGCLL1-201ENST00000274901 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
HMGCLL1-201ENST00000274901 MT3P25713 68 aa2.57□□□□□ -2
HMGCLL1-201ENST00000274901 KRTAP6-2Q3LI66 62 aa2.54□□□□□ -2
HMGCLL1-201ENST00000274901 SPRR2DP22532 72 aa2.53□□□□□ -2
HMGCLL1-201ENST00000274901 NEBP20929 6669 aa2.48□□□□□ -2.01
HMGCLL1-201ENST00000274901 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
HMGCLL1-201ENST00000274901 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
HMGCLL1-201ENST00000274901 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
HMGCLL1-201ENST00000274901 MT4P47944 62 aa2.26□□□□□ -2.05
HMGCLL1-201ENST00000274901 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
HMGCLL1-201ENST00000274901 KRTAP20-1Q3LI63 56 aa2.19□□□□□ -2.06
HMGCLL1-201ENST00000274901 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
HMGCLL1-201ENST00000274901 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
HMGCLL1-201ENST00000274901 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
HMGCLL1-201ENST00000274901 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
HMGCLL1-201ENST00000274901 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
HMGCLL1-201ENST00000274901 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
HMGCLL1-201ENST00000274901 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
HMGCLL1-201ENST00000274901 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
HMGCLL1-201ENST00000274901 LCE1CQ5T751 118 aa1.76□□□□□ -2.13
HMGCLL1-201ENST00000274901 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
HMGCLL1-201ENST00000274901 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
HMGCLL1-201ENST00000274901 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
HMGCLL1-201ENST00000274901 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
HMGCLL1-201ENST00000274901 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.14
HMGCLL1-201ENST00000274901 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
HMGCLL1-201ENST00000274901 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 35.9 ms