RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 KRTAP9-2Q9BYQ4 174 aa3.89□□□□□ -1.79
SKP2-202ENST00000274255 LCE3BQ5TA77 95 aa3.85□□□□□ -1.79
SKP2-202ENST00000274255 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
SKP2-202ENST00000274255 LCE2DQ5TA82 110 aaPredicted RBP3.83□□□□□ -1.8
SKP2-202ENST00000274255 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
SKP2-202ENST00000274255 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
SKP2-202ENST00000274255 LCE2AQ5TA79 106 aaPredicted RBP3.82□□□□□ -1.8
SKP2-202ENST00000274255 MT1LQ93083 61 aa3.79□□□□□ -1.8
SKP2-202ENST00000274255 SSPOA2VEC9 5147 aa3.77□□□□□ -1.81
SKP2-202ENST00000274255 KRTAP4-9Q9BYQ8 210 aa3.76□□□□□ -1.81
SKP2-202ENST00000274255 MT1EP04732 61 aa3.75□□□□□ -1.81
SKP2-202ENST00000274255 KRTAP9-6A0A140TA67 174 aa3.74□□□□□ -1.81
SKP2-202ENST00000274255 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
SKP2-202ENST00000274255 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
SKP2-202ENST00000274255 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
SKP2-202ENST00000274255 MT1MQ8N339 61 aa3.56□□□□□ -1.84
SKP2-202ENST00000274255 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
SKP2-202ENST00000274255 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
SKP2-202ENST00000274255 MDN1Q9NU22 5596 aa3.48□□□□□ -1.85
SKP2-202ENST00000274255 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
SKP2-202ENST00000274255 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
SKP2-202ENST00000274255 PRM1P04553 51 aa3.4□□□□□ -1.86
SKP2-202ENST00000274255 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
SKP2-202ENST00000274255 KRTAP19-6Q3LI70 58 aa3.38□□□□□ -1.87
SKP2-202ENST00000274255 SPRR2EP22531 72 aa3.37□□□□□ -1.87
SKP2-202ENST00000274255 SPRR2BP35325 72 aa3.37□□□□□ -1.87
SKP2-202ENST00000274255 SPRR2AP35326 72 aa3.37□□□□□ -1.87
SKP2-202ENST00000274255 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
SKP2-202ENST00000274255 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
SKP2-202ENST00000274255 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
SKP2-202ENST00000274255 LCE5AQ5TCM9 118 aa3.21□□□□□ -1.9
SKP2-202ENST00000274255 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
SKP2-202ENST00000274255 SPRR2DP22532 72 aa3.18□□□□□ -1.9
SKP2-202ENST00000274255 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
SKP2-202ENST00000274255 MT1AP04731 61 aa3.12□□□□□ -1.91
SKP2-202ENST00000274255 MT4P47944 62 aa3.09□□□□□ -1.92
SKP2-202ENST00000274255 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.92
SKP2-202ENST00000274255 LCE1AQ5T7P2 110 aa3.06□□□□□ -1.92
SKP2-202ENST00000274255 KRTAP4-6Q9BYQ5 205 aa3.06□□□□□ -1.92
SKP2-202ENST00000274255 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
SKP2-202ENST00000274255 MT3P25713 68 aa2.99□□□□□ -1.93
SKP2-202ENST00000274255 NEBP20929 6669 aa2.97□□□□□ -1.93
SKP2-202ENST00000274255 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
SKP2-202ENST00000274255 LCE1DQ5T752 114 aa2.94□□□□□ -1.94
SKP2-202ENST00000274255 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
SKP2-202ENST00000274255 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
SKP2-202ENST00000274255 KRTAP5-9P26371 169 aa2.9□□□□□ -1.94
SKP2-202ENST00000274255 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
SKP2-202ENST00000274255 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
SKP2-202ENST00000274255 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
SKP2-202ENST00000274255 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
SKP2-202ENST00000274255 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
SKP2-202ENST00000274255 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
SKP2-202ENST00000274255 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
SKP2-202ENST00000274255 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
SKP2-202ENST00000274255 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
SKP2-202ENST00000274255 LCE4AQ5TA78 99 aa2.43□□□□□ -2.02
SKP2-202ENST00000274255 KRTAP9-9Q9BYP9 154 aa2.38□□□□□ -2.03
SKP2-202ENST00000274255 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
SKP2-202ENST00000274255 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
SKP2-202ENST00000274255 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
SKP2-202ENST00000274255 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.04
SKP2-202ENST00000274255 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
SKP2-202ENST00000274255 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
SKP2-202ENST00000274255 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
SKP2-202ENST00000274255 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
SKP2-202ENST00000274255 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
SKP2-202ENST00000274255 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
SKP2-202ENST00000274255 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
SKP2-202ENST00000274255 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
SKP2-202ENST00000274255 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
SKP2-202ENST00000274255 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.11
SKP2-202ENST00000274255 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
SKP2-202ENST00000274255 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
SKP2-202ENST00000274255 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
SKP2-202ENST00000274255 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
SKP2-202ENST00000274255 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 313.2 ms